LOCUS BC029587 1472 bp mRNA linear HTC 16-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 167, member A, mRNA
(cDNA clone IMAGE:5271799), with apparent retained intron.
ACCESSION BC029587
VERSION BC029587.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1472)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1472)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698772
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1472
/db_xref="H-InvDB:HIT000091859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5271799"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 327 a 451 c 448 g 246 t
ORIGIN
1 gaggattcac cggagctcgg ggaggcgagg cgggagccct gagctgaggc cgggcagcgc
61 ggacccgcgc aggaggaggc ggcggggaca ccggcgagtc cccagcaggg cccctgggct
121 cccggaaggg tctccagcca cctgcccttc ccgagaagag agagctctgg gccttcttcc
181 tgccagtctg gtcttcgagt gcgttcagga cagatagacc ttggcacagg ctgccccgag
241 attcctgcga cgctgtctgt tcctgccttc tgtggagcat ggcacccaca ggcttccagg
301 acggatcata gacccgagcc tccaggaggg cgccctgtgc ggctcactgc acggtccctc
361 tcagctcccc tgccacccag cctctgaggc cggctcctgt cccggaaatg ccctcgggca
421 cctggatgag gccatcccag agcgggaccc aactgtgcca cccaccaagc ctccccctgc
481 gccccccgtg ccctcgcatg tccggctgcc agggcagact gtagaatgtc tgtgccccag
541 atccacgtgg aagaagtggg tgcagaagag ggggcgggag cagccgcacc acccgatgac
601 cacctccgga gcctgaaggc cctcaccgag aaactgaggc tggagacccg caggccctcc
661 tacctggaat ggcaggccag gctggaggag cagacctggc ccttcccgag gccggctgcg
721 gagccacagg cgagcttgga ggagggggag cgtggggggc aggagccctt gctccccctg
781 agagaggctg ggcagcaccc cccttctgcc aggagtgcca gccaaggtgc cagacccctg
841 tccactggca agctggaagg ctttcagagc atcgatgaag ctatagcctg gctcaggaag
901 gaactggaaa tcaggagaaa agagatctgt acaagtgcgt aaaaaacgag agaggaaaaa
961 aagaacattg agatgctcgc tggcaagatc ttggaaaggc ctagaaaggg aaggcttgat
1021 tgcattaatg gaaatgctct acagatacgg agatgcggct gcaggaccag caactggcca
1081 gacagctcat gcgcctgcgt ggcgacatca acaagctgaa aatcgaacac acctgccgcc
1141 tccacagggg gatgctcaac gatgccacct acgagctgga ggagcgggat gagctggccg
1201 acctcttctg tgactcccct cttgcctcct ccttcagcct ctccacacca ctcaagctta
1261 ttggcgtgac caagatgaac atcaactctc ggaggggcgt gaccggggcc tcctggtgga
1321 ttctggtggt gtcaccttac tgccctctct ggaaagacaa tctagggagc ccagaggccc
1381 atcctgagcc tcctctgaga ttttgtgcct gacctaaaca actagtttta ataagactgt
1441 tactgatgtg ttgtccaaaa aaaaaaaaaa aa
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