LOCUS BC029564 2022 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens beta-1,3-N-acetylgalactosaminyltransferase 2, mRNA (cDNA clone MGC:39558 IMAGE:4826983), complete cds. ACCESSION BC029564 VERSION BC029564.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2022) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2022) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 63 Row: a Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749020. FEATURES Location/Qualifiers source 1..2022 /db_xref="H-InvDB:HIT000040825" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39558 IMAGE:4826983" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2022 /gene="B3GALNT2" /gene_synonym="B3GalNAc-T2" /gene_synonym="MGC39558" /db_xref="GeneID:148789" /db_xref="HGNC:HGNC:28596" /db_xref="MIM:610194" CDS 230..1732 /gene="B3GALNT2" /gene_synonym="B3GalNAc-T2" /gene_synonym="MGC39558" /codon_start=1 /product="beta-1,3-N-acetylgalactosaminyltransferase 2" /protein_id="AAH29564.1" /db_xref="GeneID:148789" /db_xref="HGNC:HGNC:28596" /db_xref="MIM:610194" /translation="MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFP QWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVP VEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSL GVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPES FEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFI YTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPA KLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVD RTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAI GPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR" BASE COUNT 514 a 448 c 562 g 498 t ORIGIN 1 aggcggaggg ggcggggctt cggccggcta agccgcggcc acccgcggtc tgagggaccg 61 gaggagcggg gccgggagct gcgaggagcc ctccagacgt cgccgagcgc gagggcgggc 121 gtgctcggag tggtcgctcg tcagccgccg cccctcagtc tccgcacttg caggtcccct 181 ccctctccgc cgggacgcgg gagagcccgg ctcgcggcgg gggcggccaa tgcgaaactg 241 gctggtgctg ctgtgcccgt gtgtgctcgg ggccgcgctg cacctctggc tgcggctgcg 301 ctccccgccg cccgcctgcg cctccggggc cggccctgca gatcagttgg ccttatttcc 361 tcagtggaaa tctactcact atgatgtggt agttggcgtg ttgtcagctc gcaataacca 421 tgaacttcga aacgtgataa gaagcacctg gatgagacat ttgctacagc atcccacatt 481 aagtcaacgt gtgcttgtga agttcataat aggtgctcat ggctgtgaag tgcctgtgga 541 agacagggaa gatccttatt cctgtaaact actcaacatc acaaatccag ttttgaatca 601 ggaaattgaa gcgttcagtc tgtccgaaga cacttcatcg gggctgcctg aggatcgagt 661 tgtcagcgtg agtttccgag ttctctaccc catcgttatt accagtcttg gagtgttcta 721 cgatgccaat gatgtgggtt tccagaggaa catcactgtc aaactttatc aggcagaaca 781 agaggaggcc ctcttcattg ctcgcttcag tcctccaagc tgtggtgtgc aggtgaacaa 841 gctgtggtac aagcccgtgg aacaattcat cttaccagag agctttgaag gtacaatcgt 901 gtgggagagc caagacctcc acggccttgt gtcaagaaat ctccacaaag tgacagtgaa 961 tgatggaggg ggagttctca gagtcattac agctggggag ggtgcattgc ctcatgaatt 1021 cttggaaggt gtggagggag ttgcaggtgg ttttatatat actattcagg aaggtgatgc 1081 tctcttacac aaccttcatt ctcgccctca aagacttatt gatcatataa ggaatctcca 1141 tgaggaagat gccttactga aggaggaaag cagcatctat gatgatattg tttttgtgga 1201 tgttgtcgac acttatcgta atgttcctgc aaaattattg aacttctata gatggactgt 1261 ggaaacaacg agcttcaatt tgttgctgaa gacagatgat gactgttaca tagacctcga 1321 agctgtattt aataggattg tccaaaagaa tctggatggg cctaattttt ggtggggaaa 1381 tttcagactg aattgggcag ttgaccgaac cggaaagtgg caggagttgg agtacccgag 1441 ccccgcttac cctgcctttg catgtgggtc aggatatgtg atctccaagg acatcgtcaa 1501 gtggctggca agcaactcgg ggaggttaaa gacctatcag ggtgaagatg taagcatggg 1561 catctggatg gctgccatag gacctaaaag ataccaggac agtctgtggc tgtgtgagaa 1621 gacctgtgag acaggaatgc tgtcttctcc tcagtattct ccgtgggaac tgacggaact 1681 gtggaaactg aaggaacggt gcggtgatcc ttgtcgatgt caagcaagat aacagggact 1741 tgaattagca gagtctaaaa tcagggcagg caaacgataa tctgagtgca agtctgagga 1801 gtcccagggt ttagcagtag actgtatggt ctttcaagag agttccagac tggcactttc 1861 acccagaacc aatgcggtgt ttcttaatgt ttgcacaaat ttccttaaaa atcaacttgt 1921 actgtagcat aagaaaagtt tttatttatc tattggaaga ttatcagaaa aataccaagt 1981 tattttataa aagaaaaaat atttctaaaa aaaaaaaaaa aa //