LOCUS       BC029564                2022 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens beta-1,3-N-acetylgalactosaminyltransferase 2, mRNA
            (cDNA clone MGC:39558 IMAGE:4826983), complete cds.
ACCESSION   BC029564
VERSION     BC029564.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2022)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 63 Row: a Column: 15
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22749020.
FEATURES             Location/Qualifiers
     source          1..2022
                     /db_xref="H-InvDB:HIT000040825"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:39558 IMAGE:4826983"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2022
                     /gene="B3GALNT2"
                     /gene_synonym="B3GalNAc-T2"
                     /gene_synonym="MGC39558"
                     /db_xref="GeneID:148789"
                     /db_xref="HGNC:HGNC:28596"
                     /db_xref="MIM:610194"
     CDS             230..1732
                     /gene="B3GALNT2"
                     /gene_synonym="B3GalNAc-T2"
                     /gene_synonym="MGC39558"
                     /codon_start=1
                     /product="beta-1,3-N-acetylgalactosaminyltransferase 2"
                     /protein_id="AAH29564.1"
                     /db_xref="GeneID:148789"
                     /db_xref="HGNC:HGNC:28596"
                     /db_xref="MIM:610194"
                     /translation="MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFP
                     QWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVP
                     VEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSL
                     GVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPES
                     FEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFI
                     YTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPA
                     KLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVD
                     RTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAI
                     GPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR"
BASE COUNT          514 a          448 c          562 g          498 t
ORIGIN      
        1 aggcggaggg ggcggggctt cggccggcta agccgcggcc acccgcggtc tgagggaccg
       61 gaggagcggg gccgggagct gcgaggagcc ctccagacgt cgccgagcgc gagggcgggc
      121 gtgctcggag tggtcgctcg tcagccgccg cccctcagtc tccgcacttg caggtcccct
      181 ccctctccgc cgggacgcgg gagagcccgg ctcgcggcgg gggcggccaa tgcgaaactg
      241 gctggtgctg ctgtgcccgt gtgtgctcgg ggccgcgctg cacctctggc tgcggctgcg
      301 ctccccgccg cccgcctgcg cctccggggc cggccctgca gatcagttgg ccttatttcc
      361 tcagtggaaa tctactcact atgatgtggt agttggcgtg ttgtcagctc gcaataacca
      421 tgaacttcga aacgtgataa gaagcacctg gatgagacat ttgctacagc atcccacatt
      481 aagtcaacgt gtgcttgtga agttcataat aggtgctcat ggctgtgaag tgcctgtgga
      541 agacagggaa gatccttatt cctgtaaact actcaacatc acaaatccag ttttgaatca
      601 ggaaattgaa gcgttcagtc tgtccgaaga cacttcatcg gggctgcctg aggatcgagt
      661 tgtcagcgtg agtttccgag ttctctaccc catcgttatt accagtcttg gagtgttcta
      721 cgatgccaat gatgtgggtt tccagaggaa catcactgtc aaactttatc aggcagaaca
      781 agaggaggcc ctcttcattg ctcgcttcag tcctccaagc tgtggtgtgc aggtgaacaa
      841 gctgtggtac aagcccgtgg aacaattcat cttaccagag agctttgaag gtacaatcgt
      901 gtgggagagc caagacctcc acggccttgt gtcaagaaat ctccacaaag tgacagtgaa
      961 tgatggaggg ggagttctca gagtcattac agctggggag ggtgcattgc ctcatgaatt
     1021 cttggaaggt gtggagggag ttgcaggtgg ttttatatat actattcagg aaggtgatgc
     1081 tctcttacac aaccttcatt ctcgccctca aagacttatt gatcatataa ggaatctcca
     1141 tgaggaagat gccttactga aggaggaaag cagcatctat gatgatattg tttttgtgga
     1201 tgttgtcgac acttatcgta atgttcctgc aaaattattg aacttctata gatggactgt
     1261 ggaaacaacg agcttcaatt tgttgctgaa gacagatgat gactgttaca tagacctcga
     1321 agctgtattt aataggattg tccaaaagaa tctggatggg cctaattttt ggtggggaaa
     1381 tttcagactg aattgggcag ttgaccgaac cggaaagtgg caggagttgg agtacccgag
     1441 ccccgcttac cctgcctttg catgtgggtc aggatatgtg atctccaagg acatcgtcaa
     1501 gtggctggca agcaactcgg ggaggttaaa gacctatcag ggtgaagatg taagcatggg
     1561 catctggatg gctgccatag gacctaaaag ataccaggac agtctgtggc tgtgtgagaa
     1621 gacctgtgag acaggaatgc tgtcttctcc tcagtattct ccgtgggaac tgacggaact
     1681 gtggaaactg aaggaacggt gcggtgatcc ttgtcgatgt caagcaagat aacagggact
     1741 tgaattagca gagtctaaaa tcagggcagg caaacgataa tctgagtgca agtctgagga
     1801 gtcccagggt ttagcagtag actgtatggt ctttcaagag agttccagac tggcactttc
     1861 acccagaacc aatgcggtgt ttcttaatgt ttgcacaaat ttccttaaaa atcaacttgt
     1921 actgtagcat aagaaaagtt tttatttatc tattggaaga ttatcagaaa aataccaagt
     1981 tattttataa aagaaaaaat atttctaaaa aaaaaaaaaa aa
//