LOCUS BC029554 945 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens C-type lectin domain family 1, member B, mRNA (cDNA
clone MGC:39478 IMAGE:5269252), complete cds.
ACCESSION BC029554
VERSION BC029554.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 945)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 945)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: g Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56711305.
FEATURES Location/Qualifiers
source 1..945
/db_xref="H-InvDB:HIT000040818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39478 IMAGE:5269252"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..945
/gene="CLEC1B"
/gene_synonym="1810061I13Rik"
/gene_synonym="CLEC2"
/gene_synonym="PRO1384"
/gene_synonym="QDED721"
/db_xref="GeneID:51266"
/db_xref="MIM:606783"
CDS 272..862
/gene="CLEC1B"
/gene_synonym="1810061I13Rik"
/gene_synonym="CLEC2"
/gene_synonym="PRO1384"
/gene_synonym="QDED721"
/codon_start=1
/product="CLEC1B protein"
/protein_id="AAH29554.1"
/db_xref="GeneID:51266"
/db_xref="MIM:606783"
/translation="MQDEDGYITLNIKTRKPALVSAVMQRNYLQDENENRTGTLQQLA
KRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNA
TLLKIDNRNIVEYIKARTHLIRWVGLSRQKSNEVWKWEDGSVISENMFEFLEDGKGNM
NCAYFHNGKMHPTFCENKHYLMCERKAGMTKVDQLP"
BASE COUNT 324 a 175 c 209 g 237 t
ORIGIN
1 gagatggttc aactctctta cttggttatt tccatctcgg ttattccttg ctccagcaga
61 atcctgaaat gtccatgtat ctctgagcag ctatgaagaa gcttcctgga aaacaataag
121 caaaggaaaa caaatgtgtc ccatctcaca tggttctacc ctactaaaga caggaagatc
181 ataaactgac agatactgaa attgtaagag ttggaaacta cattttgcaa agtcattgaa
241 ctctgagctc agttgcagta ctcgggaagc catgcaggat gaagatggat acatcacctt
301 aaatattaaa actcggaaac cagctctcgt ctccgctgtc atgcagcgca attacctaca
361 agatgagaat gaaaatcgca caggaactct gcaacaatta gcaaagcgct tctgtcaata
421 tgtggtaaaa caatcagaac taaagggcac tttcaaaggt cataaatgca gcccctgtga
481 cacaaactgg agatattatg gagatagctg ctatgggttc ttcaggcaca acttaacatg
541 ggaagagagt aagcagtact gcactgacat gaatgctact ctcctgaaga ttgacaaccg
601 gaacattgtg gagtacatca aagccaggac tcatttaatt cgttgggtcg gattatctcg
661 ccagaagtcg aatgaggtct ggaagtggga ggatggctcg gttatctcag aaaatatgtt
721 tgagtttttg gaagatggaa aaggaaatat gaattgtgct tattttcata atgggaaaat
781 gcaccctacc ttctgtgaga acaaacatta tttaatgtgt gagaggaagg ctggcatgac
841 caaggtggac caactacctt aatgcaaaga ggtggacagg ataacacaga taagggcttt
901 attgtacaat aaaagatatg tatgaatgca aaaaaaaaaa aaaaa
//