LOCUS BC029542 842 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens CMT1A duplicated region transcript 4, mRNA (cDNA clone
MGC:33988 IMAGE:5298701), complete cds.
ACCESSION BC029542
VERSION BC029542.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55743119.
FEATURES Location/Qualifiers
source 1..842
/db_xref="H-InvDB:HIT000050978"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33988 IMAGE:5298701"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..842
/gene="CDRT4"
/gene_synonym="FLJ36674"
/gene_synonym="NBLA10383"
/db_xref="GeneID:284040"
/db_xref="HGNC:HGNC:14383"
CDS 282..740
/gene="CDRT4"
/gene_synonym="FLJ36674"
/gene_synonym="NBLA10383"
/codon_start=1
/product="CMT1A duplicated region transcript 4"
/protein_id="AAH29542.2"
/db_xref="GeneID:284040"
/db_xref="HGNC:HGNC:14383"
/translation="MDARRMKKEEGLTENTGLPRKLLEKHDPWPAYVTYTSQTVKRLI
EKSKTRELECMRALEERPWASRQNKPSSVIQPKRRKSSKSSGKAVFRDTLSESTLSMW
GAYSVLAMAPTMIPEPTHLHADSRDCPTENYNKIIFARKPMMRMLPTVRY"
BASE COUNT 299 a 182 c 209 g 152 t
ORIGIN
1 aggggcaaga ggatggttag ctgcagcaaa gagagagcca aagagaagtg ggattgagag
61 cacaggggac agctggagac aaaatataaa cgccgggcag gggaacagcc aagatagtgc
121 aggaaggatg gggaatcaca gaaacttctc aggaacccag tgaaatgagc tgcaccagga
181 actttaagag agagttttca gctgggagaa gaggaaggca agatatcaga acaagaatct
241 gaacctgtga tgttaagaaa tcagtaaata ttaaaaagaa gatggatgca agaaggatga
301 agaaagaaga aggactcaca gaaaacactg gacttccccg gaagctactt gaaaaacatg
361 acccctggcc ggcctatgtc acctatacct ctcagacagt gaaaagactc attgagaaaa
421 gcaaaactag agaactggaa tgcatgcgtg ccctcgagga aagaccctgg gcatcaaggc
481 agaataaacc ttccagcgtc attcagccga aaaggaggaa gtcttccaag tcttctggca
541 aagctgtgtt cagggacacg ctgtcagaat ccacgttatc aatgtggggc gcttattcgg
601 tattggccat ggctcctacc atgatcccag aacccacaca cttacatgcg gattccagag
661 actgtccaac tgaaaactat aacaagatca tctttgcccg caagcctatg atgaggatgc
721 tccctacagt tcgctactga ccaacaagga gaaacatgca aatgttttag ccaggggtcc
781 ctgcagccat tccccaagaa cgtacaaaag ttaagctcca tttaccaaaa aaaaaaaaaa
841 aa
//