LOCUS BC029538 1232 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 52, mRNA (cDNA clone
MGC:33961 IMAGE:5303467), complete cds.
ACCESSION BC029538
VERSION BC029538.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1232)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1232)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: p Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37620205.
FEATURES Location/Qualifiers
source 1..1232
/db_xref="H-InvDB:HIT000040813"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33961 IMAGE:5303467"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1232
/gene="C1orf52"
/gene_synonym="FLJ44982"
/gene_synonym="gm117"
/gene_synonym="RP11-234D19.1"
/db_xref="GeneID:148423"
/db_xref="HGNC:HGNC:24871"
CDS 10..558
/gene="C1orf52"
/gene_synonym="FLJ44982"
/gene_synonym="gm117"
/gene_synonym="RP11-234D19.1"
/codon_start=1
/product="chromosome 1 open reading frame 52"
/protein_id="AAH29538.1"
/db_xref="GeneID:148423"
/db_xref="HGNC:HGNC:24871"
/translation="MAAEEKDPLSYFAAYGSSSSGSSDEEDNIEPEETSRRTPDPAKS
AGGCRNKAEKRLPGPDELFRSVTRPAFLYNPLNKQIDWERHVVKAPEEPPKEFKIWKS
NYVPPPETYTTEKKPPPPELDMAIKWSNIYEDNGDDAPQNAKKARLLPEGEETLESDD
EKDEHTSKKRKVEPGEPAKKKK"
BASE COUNT 393 a 225 c 276 g 338 t
ORIGIN
1 gcagccgtca tggcagcgga ggagaaggac cctctgagct attttgcggc atacgggagc
61 agcagctcag gctcctcgga cgaggaggat aacatcgagc cggaggagac gagtcgcaga
121 accccggatc cggcgaagtc ggcgggcggc tgtaggaaca aggcggagaa gcggctcccg
181 ggacctgacg agctgtttag gagcgtgact cgcccggcct ttctctacaa tccgctcaac
241 aaacagatag actgggagag gcacgtcgtc aaggcgcctg aggagcctcc aaaggaattc
301 aaaatatgga agtcaaatta tgtaccacct cctgagacct acaccactga gaagaagcct
361 ccgcctccag agcttgacat ggcaataaaa tggtctaaca tatatgagga caatggtgat
421 gatgctccac agaatgctaa gaaagctagg cttctaccag aaggggagga gacgttggaa
481 tcagatgatg aaaaagatga gcatacttct aaaaagcgca aagtagagcc aggagaacca
541 gcaaagaaga aaaagtagaa acaaatgacc agaatttctg tactgctaaa cttgttgaaa
601 tgtttctttg gacagattaa gttgatattg tgggttatta tgccacatct ccatgaaaat
661 gcatacgtta atgaactaat aagtattgcc tcaagaactt tccactatag aattcttttt
721 ttatttaaaa catgtatgta tttaaaactc aactggtgac ttgtgattgt gaaattgata
781 acacttggat gcattcttgc tctcacagaa ttggtgacat gctttgagag ttttgtcaca
841 tgttgacatg ccaatgttct tataaacctt ttataaagga atatattttt aaagtaaata
901 tattgtaatg tactgtgaac ttgtagggtg cttttcaaca gtctttgtac agtgtaaata
961 gatcatggaa ataaaattac ttattcaata ttactattac tgtataacat taacatttga
1021 atgtttgtct gtgacaagta ccctatttgt cgtgtgacat tttaagttgt aataagaagt
1081 attaccattt aaagagtgcc tcctgtgttc caggtgcttt gtgcatatat tttctctgat
1141 ccttaaacaa cctagcgcaa ggtattatta gtattctcat tttataataa agagtgcttg
1201 agtagcttgt ctgaaagaaa aaaaaaaaaa aa
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