LOCUS BC029536 1021 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 65, mRNA (cDNA clone
MGC:33948 IMAGE:5298158), complete cds.
ACCESSION BC029536
VERSION BC029536.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1021)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255122.
FEATURES Location/Qualifiers
source 1..1021
/db_xref="H-InvDB:HIT000040811"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33948 IMAGE:5298158"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1021
/gene="C11orf65"
/gene_synonym="MGC33948"
/db_xref="GeneID:160140"
/db_xref="HGNC:HGNC:28519"
CDS 44..985
/gene="C11orf65"
/gene_synonym="MGC33948"
/codon_start=1
/product="chromosome 11 open reading frame 65"
/protein_id="AAH29536.1"
/db_xref="GeneID:160140"
/db_xref="HGNC:HGNC:28519"
/translation="MPWKEESEFTKQDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQ
GEPRQIVKYINPKEAELLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPR
NYAKLPAKHTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFWLSTDGMVVEDKKESE
FHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKSTHHETLGLIHTATKGLIRAFE
DGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATSNSSANFKGFRFNQAQKNIYNY
GGDISKMQMGIPDDTYYENVYQEPNVTRLTPDSTYGL"
BASE COUNT 370 a 168 c 225 g 258 t
ORIGIN
1 aggagtccag cggcgcccgg gccagcagcg attggaattt caaatgcctt ggaaagagga
61 atcagaattt acaaagcagg ataaggctgc cagagtcatt cagcaggcct ggaaaagttt
121 ccttaatgtc gctatatttc aacactttaa aagtctgatt gatttaagaa gacaaggaga
181 accacgtcag atagtgaaat atattaatcc caaagaggca gagcttctag atgctgctgc
241 tggcattcat gtgcgattca gattaggtgg agttaaattt ccacctgata tatactataa
301 gatttttact cacagaccta ttgaagatct ctgtgctaac agccctagaa attatgcaaa
361 acttccagca aagcatacat ctcataataa aaatgatcat cttcaggaag aggatcatag
421 tggctggtat catcgtatag aaaacaatgg ctggaggcca gtttctgata cattttggct
481 atctactgat ggtatggtgg tggaagacaa aaaggaaagt gaattccatt tctctaaact
541 gaagagaagg caagatttgg aaaagaaaag aaaacttaga aaaatagagt ggatgaggca
601 aatgtactac tcaggaagtc tggaggctaa gtcaacacat catgaaactc taggactaat
661 tcacactgca acaaaggggc tgattagagc ttttgaagat ggggggatag attctgtgat
721 ggaatgggaa gtggatgaag tgctgaactg gacaaataca ctgaactttg atgagtacat
781 tgccagctgg aaggaaattg ctacaagcaa ctcttcggct aacttcaaag gattcaggtt
841 taatcaagca cagaaaaaca tatataacta tggaggagac atatcaaaga tgcaaatggg
901 aataccagat gatacttact atgaaaatgt ttatcaagaa ccaaatgtaa ctagattaac
961 gcctgattct acttatggac tataaagtac tttatttcta ttccgaaaaa aaaaaaaaaa
1021 a
//