LOCUS BC029526 1036 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens acyl-Coenzyme A binding domain containing 7, mRNA
(cDNA clone MGC:33893 IMAGE:5301753), complete cds.
ACCESSION BC029526
VERSION BC029526.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1036)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1036)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1036
/db_xref="H-InvDB:HIT000040804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33893 IMAGE:5301753"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1036
/gene="ACBD7"
/gene_synonym="bA455B2.2"
/db_xref="GeneID:414149"
/db_xref="HGNC:HGNC:17715"
CDS 49..315
/gene="ACBD7"
/gene_synonym="bA455B2.2"
/codon_start=1
/product="ACBD7 protein"
/protein_id="AAH29526.1"
/db_xref="GeneID:414149"
/db_xref="HGNC:HGNC:17715"
/translation="MALQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIA
CPGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYGI"
BASE COUNT 353 a 181 c 241 g 261 t
ORIGIN
1 tgagcaccgg acgacaacag cagcagcaac aacgcggcag ccgccaccat ggccctgcag
61 gctgattttg acagggctgc agaagatgtg aggaagctga aagcaagacc agatgatgga
121 gaactgaaag aactctatgg gctttacaaa caagcaatag ttggagacat taatattgcg
181 tgtccaggaa tgctagattt gaaaggcaaa gccaaatggg aagcatggaa cctcaaaaaa
241 gggttgtcga cggaagatgc gacgagtgcc tatatttcta aagcaaagga gctgatagaa
301 aaatacggaa tttagaatac agcatatgag gaatttttcc ttttgaagac ttccaaatgc
361 tatcatgacc taacatttag agggagaggc atactgttaa cttgatgtat catgtatatt
421 tttgctatta gcatgagctg tagtacttag aagtatactg aaactacata gttaactcaa
481 ttgtacttgc ttaaaccagg tgtctttaaa agttcttttt aagaaaatgt ggcacatata
541 caccatggaa tactatggag ccataaaaag ggatgagttc atgtcctttg cagggacatg
601 gatgaagctg gaaaccatca ttctcagcaa actatcacaa gatcagaaaa ccaagcatgt
661 tctcactcat aagtgggagt tgaacaatga gaacacatgg acacagggaa gggaacatca
721 cacactgggg cctgtcgggg actagggggt taggggaggg ataacattag gagacatacc
781 tgatgtaggt gaccggttga tgggtacagc aaaccaccat ggcacatgta tacctatgta
841 acaaaactgc acgttctgca tatgtatccc agaacttaaa gtatataaaa aaaaattctt
901 ttagaaaagt attttttatt tttatagagt tagggagtac agttgcagtt tttgtttgtt
961 tgtttgtttt ttcttgagga gtctcactcc agcctgggcg acaaaacaag actccgtctc
1021 aaaaaaaaaa aaaaaa
//