LOCUS BC029515 1285 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens centrin, EF-hand protein, 1, mRNA (cDNA clone
MGC:33791 IMAGE:5297994), complete cds.
ACCESSION BC029515
VERSION BC029515.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1285)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1285)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4757973.
FEATURES Location/Qualifiers
source 1..1285
/db_xref="H-InvDB:HIT000040794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33791 IMAGE:5297994"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1285
/gene="CETN1"
/gene_synonym="CEN1"
/db_xref="GeneID:1068"
/db_xref="HGNC:HGNC:1866"
/db_xref="MIM:603187"
CDS 53..571
/gene="CETN1"
/gene_synonym="CEN1"
/codon_start=1
/product="centrin, EF-hand protein, 1"
/protein_id="AAH29515.1"
/db_xref="GeneID:1068"
/db_xref="HGNC:HGNC:1866"
/db_xref="MIM:603187"
/translation="MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDG
SGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDT
KEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEE
EFLRIMKKTSLY"
BASE COUNT 360 a 276 c 344 g 305 t
ORIGIN
1 gaatgagagc gcggggcggt gccgttggga ccacggcggc cagagcggca ggatggcttc
61 cggcttcaag aagcccagcg ctgcctccac cggccaaaag agaaaggtgg cacctaagcc
121 cgagctcact gaggatcaga agcaagaagt tcgggaagca tttgacctct tcgacgtgga
181 cggaagtggg accatcgacg cgaaggagct gaaggtggcc atgagagcgc tgggcttcga
241 acccaggaag gaagagatga agaaaatgat ctccgaggtg gacagggaag gcacggggaa
301 gatcagcttc aatgacttcc tggccgtgat gacgcagaag atgtccgaga aggacaccaa
361 agaagaaatc ctgaaggcct tcaggctctt tgatgacgat gagaccggga agatctcgtt
421 caaaaacctg aagcgtgtgg ccaacgagct gggggagaac ctcacggatg aggagctgca
481 ggagatgatc gacgaagctg atcgggatgg ggacggcgaa gtgaacgagg aggagttcct
541 tcggatcatg aagaagacca gcctttactg aagtcggttc agaagctaaa gtgactctct
601 gggttgcctg cttccatttt gtgaaacctt agaggacagc ggctgcctgt cccttcttca
661 ccccctcacc cccataattt gtctagatct atttccatat ctctagttca ataatagaat
721 ttgaaagatg cttgtaatgt gagttttggg ttttaattct caagagtcaa cctggagcac
781 atgaggttaa acaaagggcc ctgaagtttg agtgcgccct ccatttgccc tgtgctgaac
841 ttgcagagac atctgttgat ctggaggcag gacagcttct gggacacaca aaaatgtggt
901 tccctttgtc acttctttgg tggtcttaaa ttatcttgct tcatatatca ttccttaaat
961 tccagtcatt gttccagcat aatgagatgg aatctgccag tagatttgcc tagcctgtcc
1021 acttagctga ataccagttt gaaggaaaac agggtggcca cttacaaact tacggagctc
1081 aggacagata atcttataaa gaatagactt gcttgggtgg tagtacgttg tgcaattttg
1141 actattcact ggctttatac ctgcaaatga ttcttcgttc atgtgtaaat tgtccaccat
1201 gggtttatct agggctagta tgtatacctg ggctacagaa taaaaataaa atctaatact
1261 ggcccaagca aaaaaaaaaa aaaaa
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