LOCUS BC029499 1414 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens actin-related protein T2, mRNA (cDNA clone MGC:33234
IMAGE:5270604), complete cds.
ACCESSION BC029499
VERSION BC029499.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1414)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1414)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29893807.
FEATURES Location/Qualifiers
source 1..1414
/db_xref="H-InvDB:HIT000040784"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33234 IMAGE:5270604"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1414
/gene="ACTRT2"
/gene_synonym="Arp-T2"
/gene_synonym="ARPM2"
/gene_synonym="ARPT2"
/gene_synonym="FLJ25424"
/gene_synonym="HARPM2"
/db_xref="GeneID:140625"
/db_xref="HGNC:HGNC:24026"
/db_xref="MIM:608535"
CDS 187..1317
/gene="ACTRT2"
/gene_synonym="Arp-T2"
/gene_synonym="ARPM2"
/gene_synonym="ARPT2"
/gene_synonym="FLJ25424"
/gene_synonym="HARPM2"
/codon_start=1
/product="actin-related protein T2"
/protein_id="AAH29499.1"
/db_xref="GeneID:140625"
/db_xref="HGNC:HGNC:24026"
/db_xref="MIM:608535"
/translation="MFNPHALDSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKF
QAPSAEANQKYFVGEEALYKQEALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPS
DQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAVLALYASACVTGLVVDSGD
AVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGHTFPCQLDKGLVDDIKKK
LCYVALEPEKELSRRPEEVLREYKLPDGNIISLGDPLHQAPEALFVPQQLGSQSPGLS
NMVSSSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPP
DRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF"
BASE COUNT 286 a 416 c 446 g 266 t
ORIGIN
1 gccaggccac ctggagggag agcagacctg cggctgagga tgcagggctc ccgggcacgg
61 tgctagccct gccttgagac accccgagag ctgtgggaag agctgtggga tcccctattg
121 catcacaaag cggccctgga gggccggtct ttattttgat gaggctgaga agggaaggct
181 gcgggcatgt ttaatccgca tgctttagac tccccggctg tgatttttga caatggctcg
241 gggttctgca aagcgggcct gtctggggag tttggacccc ggcacatggt cagctccatc
301 gtggggcacc tgaaattcca ggctccctca gcagaggcca accagaagta ctttgtgggg
361 gaggaggccc tgtacaagca ggaggccctg cagctgcact cccctttcga gcgtggcctg
421 atcacagggt gggatgacgt ggagagactc tggaagcacc tctttgagtg ggagctaggc
481 gtgaaaccca gcgaccagcc cctgcttgca acggagccct ccctgaaccc cagggagaac
541 cgtgagaaga tggcagaagt catgttcgag aacttcggcg tgcccgcttt ctacctgtcg
601 gaccaggcgg tgctggctct ctacgcctcg gcctgtgtca cgggcctggt ggtggacagc
661 ggggatgcgg tcacctgcac tgtccccatc tttgagggtt actccctgcc ccacgcagtc
721 accaagctcc acgtggcggg cagggacatc acggagctcc tcatgcagct gctcctggcc
781 agcggccaca ccttcccctg ccagctggac aagggtctcg tggacgacat caaaaagaag
841 ctgtgctacg tggccttgga gcccgagaag gagctttccc ggaggccgga ggaggtcctg
901 agggagtaca agctgcccga cgggaacatc atcagcctcg gggacccgct gcaccaggcg
961 cccgaggccc tgttcgtgcc ccagcagctg ggcagccaga gccccgggct ctcgaatatg
1021 gtctccagca gcatcaccaa gtgtgatacc gacatccaga agatcctctt tggggagatt
1081 gtgctgtcgg ggggcactac cctgttccac gggctggatg accggcttct caaggagctg
1141 gagcagctgg cctccaagga cacccccatc aagatcacgg ctccccccga ccggtggttc
1201 tccacctgga ttggagcctc catcgtcacc tctctgagta gcttcaagca gatgtgggtc
1261 accgccgcag acttcaagga gtttgggacc tccgtggtgc agagaagatg cttctgaagg
1321 ccgcttctcg ttgggtaccg tggggggtga accctagccc cagctttggg aggatgttca
1381 ataaaggacc aatgccggaa aaaaaaaaaa aaaa
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