LOCUS BC029490 1321 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens four and a half LIM domains 5, mRNA (cDNA clone
MGC:32991 IMAGE:5273208), complete cds.
ACCESSION BC029490
VERSION BC029490.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1321)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1321)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30410800.
FEATURES Location/Qualifiers
source 1..1321
/db_xref="H-InvDB:HIT000040777"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32991 IMAGE:5273208"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1321
/gene="FHL5"
/gene_synonym="ACT"
/gene_synonym="dJ393D12.2"
/gene_synonym="FLJ33049"
/gene_synonym="RP3-393D12.2"
/db_xref="GeneID:9457"
/db_xref="HGNC:HGNC:17371"
/db_xref="MIM:605126"
CDS 391..1245
/gene="FHL5"
/gene_synonym="ACT"
/gene_synonym="dJ393D12.2"
/gene_synonym="FLJ33049"
/gene_synonym="RP3-393D12.2"
/codon_start=1
/product="four and a half LIM domains 5"
/protein_id="AAH29490.1"
/db_xref="GeneID:9457"
/db_xref="HGNC:HGNC:17371"
/db_xref="MIM:605126"
/translation="MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEEC
KKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKC
FHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFA
HYCNFCKKVITSGGITFCDQLWHKECFLCSDCRKDLCEEQFMSRDDYPFCMDCYNHLY
ANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKC
GSGMDTDI"
BASE COUNT 390 a 277 c 299 g 355 t
ORIGIN
1 gagtccacac tgcaagtcca gagagcaggg aactaccttg agtattctac tcaaacttat
61 gtctcagagt tccccaattt cccaagaagg gagagataga ggccacaatc cagggggcca
121 tctcttaagg taccaataat tttgcagccc agtaggagtc atgtacacgg tataagactt
181 ggaggaaatg cagggaccct tctgttttct cctgcaaagt tgaaaaagct gcatgcagtt
241 ggaagggatc ttcagatggt gctggtgact ttctgttcct tttggagttg acatgcatgt
301 ggattggagg aaaaataatc aacatatatt ctcctttcgt actgtttaaa tcacaggaag
361 aagcggcttt aagacaaaga tcaaaccaaa atgacaactg ctcactttta ctgtcaatac
421 tgcacagcat cacttcttgg gaagaaatat gtactaaagg atgacagtcc atactgtgtt
481 acatgttatg atcgtgtatt ttctaactat tgcgaggaat gcaaaaaacc aattgaatct
541 gattctaagg atctttgtta caaagaccgg cactggcatg aaggatgctt caagtgcacc
601 aaatgcaatc actctttggt ggaaaagcct tttgctgcca aggatgagcg cctgctgtgc
661 acggagtgct attctaacga gtgctcctcc aagtgcttcc actgcaagag gaccatcatg
721 cctggttccc gcaaaatgga atttaaggga aactactggc atgaaacctg ttttgtgtgt
781 gagaattgcc gacaacctat agggacaaag cctttgatct ccaaagagag tggcaattat
841 tgtgtgccat gttttgagaa ggagtttgct cactactgca acttttgtaa gaaggtgata
901 acttcaggtg ggataacatt ttgtgaccag ctatggcata aagagtgttt tctgtgtagt
961 gactgtagga aagatctctg tgaagaacag ttcatgtcca gagacgacta tccattctgc
1021 atggactgct acaaccatct ttatgccaac aagtgtgtag cctgttccaa acccattagt
1081 ggtctcacag gtgccaagtt tatctgcttt caagacagcc agtggcatag cgaatgcttt
1141 aactgcggga aatgctctgt ctccttggtg ggtaaaggct tcctgaccca gaacaaggaa
1201 atcttctgcc aaaaatgtgg ctccggaatg gacactgaca tctaggagac agtccttgcc
1261 cacctaaaat ccattttgcc ttcgttgtca ctaaagccag aactcaaaaa aaaaaaaaaa
1321 a
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