LOCUS BC029271 3352 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
O, mRNA (cDNA clone IMAGE:4401390), partial cds.
ACCESSION BC029271
VERSION BC029271.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: b Column: 3.
FEATURES Location/Qualifiers
source 1..3352
/db_xref="H-InvDB:HIT000091707"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4401390"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3352
/gene="PIGO"
/gene_synonym="DKFZp434M222"
/gene_synonym="FLJ00135"
/gene_synonym="MGC20536"
/gene_synonym="MGC3079"
/gene_synonym="RP11-182N22.4"
/db_xref="GeneID:84720"
/db_xref="HGNC:HGNC:23215"
CDS <1..2937
/gene="PIGO"
/gene_synonym="DKFZp434M222"
/gene_synonym="FLJ00135"
/gene_synonym="MGC20536"
/gene_synonym="MGC3079"
/gene_synonym="RP11-182N22.4"
/codon_start=1
/product="PIGO protein"
/protein_id="AAH29271.1"
/db_xref="GeneID:84720"
/db_xref="HGNC:HGNC:23215"
/translation="EIQPHHARLYRSQVDPPTTTMQRLKALTTGSLPTFIDAGSNFAS
HAIVEDNLIKQLTSAGRRVVFMGDDTWKDLFPGAFSKAFFFPSFNVRDLDTVDNGILE
HLYPTMDSGEWDVLIAHFLGVDHCGHKHGPHHPEMAKKLSQMDQVIQGLVERLENDTL
LVVAGDHGMTTNGDHGGDSELEVSAALFLYSPTAVFPSTPPEEPEVIPQVSLVPTLAL
LLGLPIPFGNIGEVMAELFSWGEYSQPHSSALAQASALHLNAQQVSRFLHTYSAATQD
LQAKELHQLQNLFSKASADYQWLLQSPKGAEATLPTVIAELQQFLRGARAMCIESWAR
FSLVRMAGGTALLAASCFICLLASQWAISPGFPFCPLLLTPVAWGLVGAIAYAGLLGT
IELKLDLVLLGAVAAVSSFLPFLWKAWAGWGSKRPLATLFPIPGPVLLLLLFRLAVFF
SDSFVVAEARATPFLLGSFILLLVVQLHWEGQLLPPKLLTMPRLGTSATTNPPRHNGA
YALRLGIGLLLCTRLAGLFHRCPEETPVCHSSPWLSPLASMVGGRAKNLWYGACVAAL
VALLAAVRLWLRRYGNLKSPEPPMLFVRWGLPLMALGTAAYWALASGADEAPPRLRVL
VSGASMVLPRAVAGLAASGLALLLWKPVTVLVKAGAGAPRTRTVLTPFSGPPTSQADL
DYVVPQIYRHMQEEFRGRLERTKSQGPLTVAAYQLGSVYSAAMVTALTLLAFPLLLLH
AERISLVFLLLFLQSFLLLHLLAAGIPVTTPGPFTVPWQAVSAWALMATQTFYSTGHQ
PVFPAIHWHAAFVGFPEGHGSCTWLPALLVGANTFASHLLFAVGCPLLLLWPFLCESQ
GLRKRQQPPGNEADARVRPEEEEEPLMEMRLRDAPQHFYAALLQLGLKYLFILGIQIL
ACALAASILRRHLMVWKVFAPKFIFEAVGFIVSSVGLLLGIALVMRVDGAVSSWFRQL
FLAQQR"
BASE COUNT 631 a 967 c 913 g 841 t
ORIGIN
1 gagattcagc cccaccatgc ccggctctac cgatctcagg ttgaccctcc taccaccacc
61 atgcagcgcc tcaaggccct caccactggc tcactgccta cctttattga tgctggtagt
121 aacttcgcca gccacgccat agtggaagac aatctcatta agcagctcac cagtgcagga
181 aggcgtgtag tcttcatggg agatgatacc tggaaagacc ttttccctgg tgctttctcc
241 aaagctttct tcttcccatc cttcaatgtc agagacctag acacagtgga caatggcatc
301 ctggaacacc tctaccccac catggacagt ggtgaatggg acgtgctgat tgctcacttc
361 ctgggtgtgg accactgtgg ccacaagcat ggccctcacc accctgaaat ggccaagaaa
421 cttagccaga tggaccaggt gatccaggga cttgtggagc gtctggagaa tgacacactg
481 ctggtagtgg ctggggacca tgggatgacc acaaatggag accatggagg ggacagtgag
541 ctggaggtct cagctgctct ctttctgtat agccccacag cagtcttccc cagcacccca
601 ccagaggagc cagaggtgat tcctcaagtt agccttgtgc ccacgctggc cctgctgctg
661 ggcctgccca tcccatttgg gaatatcggg gaagtgatgg ctgagctatt ctcatggggt
721 gagtactccc agccccactc ctctgcttta gcccaagcct cagctctcca tctcaatgct
781 cagcaggtgt cccgatttct tcatacctac tcagctgcta ctcaggacct tcaagctaag
841 gagcttcatc agctgcagaa cctcttctcc aaggcctctg ctgactacca gtggcttctc
901 cagagcccca agggggctga ggcgacactg ccgactgtga ttgctgagct gcagcagttc
961 ctgcggggag ctcgggccat gtgcatcgag tcttgggctc gtttctctct ggtccgcatg
1021 gcggggggta ctgctctctt ggctgcttcc tgctttatct gcctgctggc atctcagtgg
1081 gcaatatccc caggctttcc attctgccct ctactcctga cacctgtggc ctggggcctg
1141 gttggggcca tagcgtatgc tggactcctg ggaactattg agctgaagct agatctagtg
1201 cttctagggg ctgtggctgc agtgagctca ttcctccctt ttctgtggaa agcctgggct
1261 ggctgggggt ccaagaggcc cctggcaacc ctgtttccca tccctgggcc cgtcctgtta
1321 ctcctgctgt ttcgcttggc tgtgttcttc tctgatagtt ttgttgtagc tgaggccagg
1381 gccaccccct tccttttggg ctcattcatc ctgctcctgg ttgtccagct tcactgggag
1441 ggccagctgc ttccacctaa gctactcaca atgccccgcc ttggcacttc agccacaaca
1501 aaccccccac ggcacaatgg tgcatatgcc ctgaggcttg gaattgggtt gcttttatgt
1561 acaaggctag ctgggctttt tcatcgttgc cctgaagaga cacctgtttg ccactcctct
1621 ccctggctga gtcctctggc atccatggtg ggtggtcgag ccaagaattt gtggtatgga
1681 gcttgtgtgg cggcgctggt ggccctgtta gctgccgtgc gcttgtggct tcgccgctat
1741 ggtaatctca agagccccga gccacccatg ctctttgtgc gctggggact gcccctaatg
1801 gcattgggta ctgctgccta ctgggcattg gcgtcggggg cagatgaggc tcccccccgt
1861 ctccgggtcc tggtctctgg ggcatccatg gtgctgcctc gggctgtagc agggctggct
1921 gcttcagggc tcgcgctgct gctctggaag cctgtgacag tgctggtgaa ggctggggca
1981 ggcgctccaa ggaccaggac tgtcctcact cccttctcag gcccccccac ttctcaagct
2041 gacttggatt atgtggtccc tcaaatctac cgacacatgc aggaggagtt ccggggccgg
2101 ttagagagga ccaaatctca gggtcccctg actgtggctg cttatcagtt ggggagtgtc
2161 tactcagctg ctatggtcac agccctcacc ctgttggcct tcccacttct gctgttgcat
2221 gcggagcgca tcagccttgt gttcctgctt ctgtttctgc agagcttcct tctcctacat
2281 ctgcttgctg ctgggatacc cgtcaccacc cctggtcctt ttactgtgcc atggcaggca
2341 gtctcggctt gggccctcat ggccacacag accttctact ccacaggcca ccagcctgtc
2401 tttccagcca tccattggca tgcagccttc gtgggattcc cagagggtca tggctcctgt
2461 acttggctgc ctgctttgct agtgggagcc aacacctttg cctcccacct cctctttgca
2521 gtaggttgcc cactgctcct gctctggcct ttcctgtgtg agagtcaagg gctgcggaag
2581 agacagcagc ccccagggaa tgaagctgat gccagagtca gacccgagga ggaagaggag
2641 ccactgatgg agatgcggct ccgggatgcg cctcagcact tctatgcagc actgctgcag
2701 ctgggcctca agtacctctt tatccttggt attcagattc tggcctgtgc cttggcagcc
2761 tccatccttc gcaggcatct catggtctgg aaagtgtttg cccctaagtt catatttgag
2821 gctgtgggct tcattgtgag cagcgtggga cttctcctgg gcatagcttt ggtgatgaga
2881 gtggatggtg ctgtgagctc ctggttcagg cagctatttc tggcccagca gaggtagcct
2941 agtctgtgat tactggcact tggctacaga gagtgctgga gaacagtgta gcctggcctg
3001 tacaggtact ggatgatctg caagacaggc tcagccatac tcttactatc atgcagccag
3061 gggccgctga catctaggac ttcattattc tataattcag gaccacagtg gagtatgatc
3121 cctaactcct gatttggatg catctgaggg acaagggggg cggtctccga agtggaataa
3181 aataggccgg gcgtggtgac ttggacctat aatcccagca ctttgggagg cagaggtggg
3241 aggattgctt ggtcccagga gttcaagacc agcctgtgga acataacaag accccgtctc
3301 tactatttaa aaaaaagtgt aataaaatga taatataaaa aaaaaaaaaa aa
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