LOCUS BC029245 1893 bp mRNA linear HUM 06-JUN-2005
DEFINITION Homo sapiens leucine rich repeat containing 43, mRNA (cDNA clone
MGC:35140 IMAGE:5169080), complete cds.
ACCESSION BC029245
VERSION BC029245.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1893)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1893)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC029245.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255136.
FEATURES Location/Qualifiers
source 1..1893
/db_xref="H-InvDB:HIT000040711"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35140 IMAGE:5169080"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1893
/gene="LRRC43"
/gene_synonym="MGC35140"
/db_xref="GeneID:254050"
CDS 405..1820
/gene="LRRC43"
/gene_synonym="MGC35140"
/codon_start=1
/product="LRRC43 protein"
/protein_id="AAH29245.1"
/db_xref="GeneID:254050"
/translation="MECLCAHPPAGLQHLGLGHNKLLGPLESLYVTANHWPNLVSLDL
GFNDLTDLQSMVTSLRTLRHLRLLVLQGNPLALVPYYRGLTIDSLAQLCVLDDITVSP
NEKHLFRGLSLNGDLLAQEAQFVVTIGNIRGVLDTSVLDPEPRPEGPFITYNYYVTYD
FVKDEEGEMNESAGVLAEIVKPSPSLELLVEESPEEVVEDVIEDIVEEVTEEVEGSLE
SEVEESGESELSVISGPSTILQMPRASAEELAKLRLRIDPRLCPSPGTVLFSTAHKPW
AEVIPCSYEMQHSLRDLVPLKAFLLAGTTVTIVEEKILSWPVVLPAVDSPLSAKKGKG
EKDKKGKEKDRTGKGEKEPAKEWKVLKKKKEPPKELRQDPPILQVLGRGLVILEPLLA
GEPLVSTVCNFGVVRTLTSDRLTLARDSKKIKKVAKKEKPKAVIPIYEGDYHPEPLTV
EVQIQLNQCRSAEEALRMFAV"
BASE COUNT 466 a 528 c 546 g 353 t
ORIGIN
1 ataagtcgcg ctttcttcct caaacttggc gaacttggag ggagcttgtc cccagagagg
61 aggatgtggt gagccccgga gaggagacgg tggaggccct gctgggcctg gtccgcagcc
121 gccactcccc ctgggctctg ctgaacaact cgaatgcaga agacagtttc ctgagagaat
181 tggccatccg gaacccgctg acgatcacag acaccttctt ctactcctac ttccggtccc
241 tgcgggtaat agacaagaag gtcaccctgg tggataaaga cctcctgaaa tttctaaagc
301 tggaggagtt ggtactgagc gccaatcgaa tcaaggaggt ggatgccacc aatctgcccc
361 ccacactcaa ggtgctggag ctctacggca atgagatcag cagcatggag tgtctgtgtg
421 cccacccacc cgccggcctg cagcacttgg ggttaggcca caacaaactt ctaggcccct
481 tggaaagtct ctacgtcacc gctaatcact ggcccaacct cgtctccctg gacctgggct
541 tcaacgacct gacagacctg cagagcatgg tcaccagcct gaggaccctc cgacacctgc
601 gactcctggt gctgcaggga aacccactgg ccttggtgcc ctactaccgc ggcctcacca
661 tcgacagcct ggcccagctc tgcgtgctgg acgacatcac cgtgtctccc aatgagaagc
721 atctcttccg ggggctcagc ctcaatggcg atctcttggc acaggaggcg cagtttgtgg
781 tgaccatcgg aaacatcaga ggagtcctgg acacctctgt cttagacccg gaaccccggc
841 ccgaaggccc tttcatcact tacaactatt acgtgaccta tgattttgtg aaagatgaag
901 aaggcgaaat gaatgagtcc gcgggcgtcc tggccgagat cgtcaagccc tctcccagct
961 tagaattatt agttgaggaa tctcctgaag aggtcgtgga agacgtcatc gaagacattg
1021 ttgaagaggt tactgaagag gtcgaagggt ctctggagtc tgaggtggag gagtcaggag
1081 agtcggagct gtctgtcatc tcggggcctt cgaccatctt gcagatgccg agggcctctg
1141 cagaagagct ggccaagttg aggctgcgta tagatccccg gctctgcccg tccccaggga
1201 ctgtcctctt cagcactgcc cacaagccct gggctgaggt catcccctgc agttacgaga
1261 tgcagcactc tctcagggac ctggtcccac tgaaggcctt cctgctggcg gggaccaccg
1321 tgaccatcgt ggaggagaag attctctcct ggcctgtggt gctacctgct gttgacagtc
1381 ccctgtctgc caagaaagga aagggggaga aagacaagaa agggaaggag aaagacagga
1441 cggggaaagg agagaaagag ccggccaagg agtggaaggt gctgaagaag aagaaagagc
1501 cgcccaagga gctccggcag gaccccccca tcctccaggt gctgggccgg ggcctggtga
1561 tcctggagcc cctgctcgcc ggggagcccc tggtgtccac cgtgtgcaac ttcggcgtgg
1621 tccgcacatt gacatctgac aggctgacgt tggccaggga ttcaaagaag attaagaaag
1681 ttgccaaaaa agaaaagccg aaagccgtga ttccgatcta cgaaggcgat taccaccctg
1741 agcccctgac cgtagaggtg cagatccagc tgaaccagtg ccgctcggcg gaggaggctc
1801 tgcgcatgtt cgccgtgtag ggcgtgggca gtaaaggctg ttcccagcaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//