LOCUS BC029237 1025 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 88, mRNA (cDNA clone
IMAGE:5172399), partial cds.
ACCESSION BC029237
VERSION BC029237.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1025)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1025)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: h Column: 2.
FEATURES Location/Qualifiers
source 1..1025
/db_xref="H-InvDB:HIT000050970"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5172399"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1025
/gene="C1orf88"
/db_xref="GeneID:128344"
CDS <1..558
/gene="C1orf88"
/codon_start=1
/product="C1orf88 protein"
/protein_id="AAH29237.1"
/db_xref="GeneID:128344"
/translation="DAADNYPFGTCQQRKLFPHFHPPNLIGNKFVPLRGSPHRGPGCY
FSDGYGLAYDLSKIPTSIKGYTLGARTAVRFKPIQKEMTPHAGRYQKVSPQQEKHKQN
FAPFNVLVPRFKNYPKDTYYPSPGAYNPEKKPPPKIAWPMKFGSPDWAQVPCLQKRTL
KAELSTDKDFRKHRNRVAYLSLYYN"
BASE COUNT 296 a 231 c 232 g 266 t
ORIGIN
1 gacgctgcgg ataactaccc ttttggaaca tgtcaacaga ggaaactttt tcctcacttc
61 catcccccga atttgattgg gaacaagttt gtccctctta ggggatcacc ccacagaggg
121 cctgggtgtt atttttcaga tggatatggc ttggcatacg acttatctaa gatcccaacc
181 agtataaaag gatatacttt gggagccaga acagctgtga ggtttaagcc aatacagaag
241 gaaatgacac ctcatgcagg caggtaccag aaagtaagtc ctcagcagga aaaacacaaa
301 caaaattttg ctccatttaa tgtcttggtg cctcgattta agaactaccc aaaggacact
361 tactatccca gccctggtgc atacaaccca gagaagaagc caccgccaaa aattgcctgg
421 ccaatgaaat ttggatctcc agactgggct caggttccat gtctacagaa aagaacccta
481 aaagctgagc tgtccacaga caaagacttt agaaagcatc ggaaccgtgt ggcctaccta
541 agcctgtatt ataattgagc ggctgtaact accttcacgt gctcctctta tacacagact
601 ctccaggact gaggacagag ctgctcttct tcttctacgt tactgtggcc ctcttgtctg
661 gcagcctgga gcccagggag ggacaggggc ttatagctgc tgtatgagaa cataaagact
721 agtgcacagt gctatctcca tctaccgact tgtggtgtac acgtgcatgt ctgggtctgt
781 gggtttctgt tgggtgctga gttgggtgat ttcattttag tgaaatattt gtgggcccct
841 gctctctagt tctaattccc aggagccaat tttatatatt ctaccactag ccctggtcat
901 aggaggctgt tagcctatac atgtcaaggg tttggatggg atttgggctt gctagataca
961 gaaaacactt aaggcagatt aaaacatgta ttggagctct aaaaaaaaaa aaaaaaaaaa
1021 aaaaa
//