LOCUS BC029134 1259 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens chromosome 10 open reading frame 47, mRNA (cDNA clone
IMAGE:5186897), partial cds.
ACCESSION BC029134
VERSION BC029134.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1259)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1259)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: g Column: 20.
FEATURES Location/Qualifiers
source 1..1259
/db_xref="H-InvDB:HIT000040689"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5186897"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1259
/gene="C10orf47"
/db_xref="GeneID:254427"
/db_xref="HGNC:HGNC:23728"
CDS <1..763
/gene="C10orf47"
/codon_start=2
/product="C10orf47 protein"
/protein_id="AAH29134.2"
/db_xref="GeneID:254427"
/db_xref="HGNC:HGNC:23728"
/translation="EHPRLLRSVPTPLVMAQKISERMAGNEALSPTSPFREGRPGEWR
TPAARGPRSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVSVQERRAQ
VLATIHGHAGAFPAAGDAGEGAPGGGSSPERVARGRGLPGPAESLRAGGQAPRGPALA
NGFPSAHEALKSAPSSFAPAGKSLCFRPGPALPSTRARQSFPGPRQPNGAQDWRRADS
LPRPQGITVQFAGRGSSEEARREALRKLGLLRESS"
BASE COUNT 237 a 427 c 399 g 196 t
ORIGIN
1 ggagcacccc agactcctgc gctctgttcc cacgcccctc gttatggcgc agaagatttc
61 cgagaggatg gcggggaacg aagccctctc gcccacctcc ccgttcaggg agggccggcc
121 cggggagtgg aggacacctg ccgcccgggg gccccgcagt ggagaccctg gcccggggcc
181 cagccacccg gcgcagccca aggcaccccg cttccccagc aacatcatcg tcaccaacgg
241 cgcggcccgg gagccccgca ggaccctgtc cagggcggcc gtcagcgtgc aggagcgcag
301 ggcgcaggtg ttggccacca tccacggcca cgccggcgcc ttccccgccg cgggggacgc
361 cggcgagggg gccccagggg gcggctcctc cccggagcgg gtggcgcgtg gccggggcct
421 gccgggcccc gctgagagtc tccgggcagg gggtcaggct ccgcggggcc cggcgctggc
481 caacggcttc ccaagtgcgc acgaggccct gaagagcgca cccagctcct tcgcgcccgc
541 tgggaagtcc ctctgcttcc gccctggccc ggccctgccc agcacgcggg cccgtcagag
601 cttccccggg ccccggcagc ccaacggcgc ccaggactgg cgccgcgcag actccctgcc
661 ccggccccag ggcatcaccg tgcagttcgc gggccgcggc tcctcggagg aggcgcgcag
721 ggaggccctg cggaagctgg ggctgctcag ggagagttcg tgagggccgc gcgggctcca
781 gtccaccccg tttctcccca ccctgaagag agggtgaaag agtcgctgca cccaggagct
841 gtttggtcta aaatggaagt gacagcggga gcccctgccc tctgtggcac atcggagtct
901 agaggtgcct ggctggggcc tcctggctga gcacgcaccg caagctccag ccaccggcac
961 agagaactct tccctaaagg aatctggccg agggcttgtc tcccttttcc caagaactga
1021 gagagagaga ataacctgtt agacccatag gtttccgtga tgtgtaaatg ccatcttttg
1081 ggggttggga ggagtaggac tggtctgatt atcattcttg agtctcatct accctcttct
1141 cgaagtacat gacatgaaag ttcagatccc ttccactcag gattctcgcc gccttttcta
1201 agaaaataat aaaaaaaaat gcttgtttca ttaaaaaaaa aaaaaaaaaa aaaaaaaaa
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