LOCUS BC029112 1888 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens SAM domain, SH3 domain and nuclear localization
signals 1, mRNA (cDNA clone MGC:16947 IMAGE:4343284), complete cds.
ACCESSION BC029112
VERSION BC029112.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1888)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1888)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: l Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48762708.
FEATURES Location/Qualifiers
source 1..1888
/db_xref="H-InvDB:HIT000040680"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16947 IMAGE:4343284"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1888
/gene="SAMSN1"
/gene_synonym="HACS1"
/gene_synonym="NASH1"
/db_xref="GeneID:64092"
/db_xref="HGNC:HGNC:10528"
/db_xref="MIM:607978"
CDS 74..1195
/gene="SAMSN1"
/gene_synonym="HACS1"
/gene_synonym="NASH1"
/codon_start=1
/product="SAM domain, SH3 domain and nuclear localization
signals 1"
/protein_id="AAH29112.1"
/db_xref="GeneID:64092"
/db_xref="HGNC:HGNC:10528"
/db_xref="MIM:607978"
/translation="MLKRKPSNVSEKEKHQKPKRSSSFGNFDRFRNNSLSKPDDSTEA
HEGDPTNGSGEQSKTSNNGGGLGKKMRAISWTMKKKVGKKYIKALSEEKDEEDGENAH
PYRNSDPVIGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPY
SGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIY
VDVISEEEAAPKKIKANRRSNSKKSKTLQEFLERIHLQEYTSTLLLNGYETLEDLKDI
KESHLIELNIENPDDRRRLLSAAENFLEEEIIQEQENEPEPLSLSSDISLNKSQLDDC
PRDSGCYISSGNSDNGKEDLESENLSDMVHKIIITEPSD"
BASE COUNT 680 a 312 c 366 g 530 t
ORIGIN
1 cacactgctg actgttttca gttgtttctg taacagcaga aagtgcactc actaggagta
61 gtcagaattc aaaatgctca agagaaagcc atccaatgtt tcagagaagg agaaacatca
121 aaaaccaaag cgaagcagca gttttgggaa tttcgatcgt tttcggaata attctttatc
181 aaaaccagat gattcaactg aggcacatga aggagatccc acaaatggaa gtggagaaca
241 aagtaaaact tcaaataatg gaggcggttt gggtaaaaaa atgagagcta tttcatggac
301 aatgaagaaa aaagtgggta aaaagtacat caaagccctt tctgaggaaa aggatgagga
361 agatggagag aatgcccacc catatagaaa cagtgaccct gtgattggga cccacacaga
421 gaaggtgtcc ctcaaagcca gtgactccat ggatagtctc tacagtggac agagctcatc
481 aagtggcata acaagctgtt cagatggtac aagtaaccgg gacagctttc gactggatga
541 cgatggcccc tattcaggac cattctgtgg ccgtgccaga gtgcatacgg atttcacgcc
601 aagtccctat gacactgact ccctcaaaat caagaaagga gacatcatag acattatttg
661 caaaacacca atggggatgt ggacaggaat gttgaacaat aaagtgggaa acttcaaatt
721 catttatgtg gatgtcatct cagaagagga agcagccccc aagaaaataa aggcaaaccg
781 aaggagtaac agcaaaaaat ccaagactct gcaggagttc ctagagagga ttcatctgca
841 ggaatacacc tcaacacttt tgctcaatgg ttatgagact ctagaagatt taaaagatat
901 aaaagagagt cacctcattg aattaaatat tgaaaaccca gatgacagaa gaaggttact
961 atcagctgct gaaaacttcc ttgaagaaga aattattcaa gagcaagaaa atgaacctga
1021 gcccctatcc ttgagctcag acatctcctt aaataagtca cagttagatg actgcccaag
1081 ggactctggt tgctatatct catcaggaaa ttcagataat ggcaaagagg atctggagtc
1141 tgaaaatctg tctgacatgg tacataagat tattatcaca gagccaagtg actgaacacg
1201 cattcccaac tatatatcta cagatgcatt ccattttaac tcttcttgag ctaaaacgtc
1261 aaataggaga ggaagataag ataaatattt gtaaataaaa cctaaagttt aaatgtttta
1321 atctgaataa ttgtacataa aattttgtat ctctaacatt ccaaattact gtcaataaaa
1381 tatatattta ttattttaaa tgctatgtgt taatatttca cttgcttgta ttagaaaggc
1441 aaaatgtaag actttggtat gtgtgacata tgctttattt ggctttattt tacaagtaca
1501 gtatctgcaa aaaacaaagt aacctttttt catacctgcc agttttgaat ttatatatgt
1561 tattgaacaa atagtaatag aggattcgct gttgaaacaa gttgtccaag caatgttata
1621 ttcattttta tacttattgg gaaagtgtga gttaatattg gacacatttt atcctgatcc
1681 acagtggagt tttagtaatt atattttgtt gatttcttca ttttgttttc tggtataaaa
1741 gtagagataa tgtgtagtca cttctgattt agtgaaacca attgtaataa ttgtggaaat
1801 gttttgtctt taagtgtaaa tattttaaaa tttgacatac cctaatgtta ataataaaaa
1861 gaactatttg caaaaaaaaa aaaaaaaa
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