LOCUS       BC029104                2817 bp    mRNA    linear   HUM 11-DEC-2003
DEFINITION  Homo sapiens carnitine palmitoyltransferase 1C, mRNA (cDNA clone
            MGC:9391 IMAGE:3872727), complete cds.
ACCESSION   BC029104
VERSION     BC029104.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 13 Row: l Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22748776.
FEATURES             Location/Qualifiers
     source          1..2817
                     /db_xref="H-InvDB:HIT000040679"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:9391 IMAGE:3872727"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2817
                     /gene="CPT1C"
                     /gene_synonym="CPTIC"
                     /gene_synonym="FLJ23809"
                     /db_xref="GeneID:126129"
     CDS             281..2659
                     /gene="CPT1C"
                     /gene_synonym="CPTIC"
                     /gene_synonym="FLJ23809"
                     /codon_start=1
                     /product="CPT1C protein"
                     /protein_id="AAH29104.1"
                     /db_xref="GeneID:126129"
                     /translation="MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLS
                     RFWNDFLTGVFPASPLSWLFLFSAIQLAWFLQLDPSLGLMEKIKELLPDWGGQHHGLR
                     GVLAAALFASCLWGALIFTLHVALRLLLSYHGWLLEPHGAMSSPTKTWLALVRIFSGR
                     HPMLFSYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQASLLQ
                     WYLRLKSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMAARAGNAVHALLLYRHRLN
                     RQEIPPTLLMGMRPLCSAQYEKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMG
                     THSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVRTSLKTQAAE
                     ALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSN
                     GKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQPQRLQWDL
                     PDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQLAHFR
                     DRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVD
                     KHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFLTQVHSEQWQLSTSQIPVQQMHL
                     FDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHI
                     EDALLDVASLFQAGQHFKRRFRGSGKENSRHRCGFLSRQTGASKASMTSTDF"
     misc_feature    788..2527
                     /gene="CPT1C"
                     /gene_synonym="CPTIC"
                     /gene_synonym="FLJ23809"
                     /note="Carn_acyltransf; Region: Choline/Carnitine
                     o-acyltransferase"
                     /db_xref="CDD:pfam00755"
BASE COUNT          564 a          878 c          794 g          581 t
ORIGIN      
        1 ggaatcgggg tttctgggtg acggtgatct cggggtgggc aggactccaa aggcccgtcg
       61 acccggtggt ggactccttg cactgggatt ggacatatgc aagcgggaga tttggggccg
      121 gcgctcaaaa tcggggggcg ggggtggact cgggtttgga ccccaggatc cgatcagcgg
      181 acccttgatt caacgtgagg tcccgaattg acgtccttcc ctcaaaacct ccgggtctac
      241 aaaccaggac cctcaagacc cttcagggct ccagcgtgac atggctgaag cgcaccaggc
      301 cgtgggcttc cgaccctcgc tgacctcgga cggggctgaa gtggaactca gtgcccctgt
      361 gctgcaggag atctacctct ctggcctgcg ctcctggaaa aggcatctct cacgtttctg
      421 gaatgacttt ctcaccggtg tgtttcctgc cagccccctc agttggcttt tcctcttcag
      481 tgccatccag cttgcctggt tcctccagct ggatccttcc ttaggactga tggagaagat
      541 caaagagttg ctgcctgact ggggtggaca acaccacggg ctccgggggg tcctggcagc
      601 cgcgctgttt gcctcgtgtt tgtggggagc cctgatcttc acactgcacg tggccctgag
      661 gctgcttctg tcctaccacg gctggcttct tgagccccac ggagccatgt cctcccccac
      721 caagacctgg ctggccctgg tccgcatctt ctctggccgc cacccgatgc tgttcagtta
      781 ccagcgctcc ctgccacgcc agcccgtgcc ctctgtgcag gacaccgtgc gcaagtacct
      841 ggagtcggtc cggcccatcc tctccgacga ggacttcgac tggaccgcgg tcctggcgca
      901 ggaattcctg aggctgcagg cgtcgctgct gcagtggtac ctgcggctca agtcctggtg
      961 ggcgtccaat tatgtcagtg actggtggga ggaatttgtg tacctgcgct cccgaaatcc
     1021 gctgatggtg aacagcaact attacatgat ggcagctcgc gctgggaatg ccgtccatgc
     1081 cctcctcctg taccgccacc gcctgaaccg ccaggagata cccccgactt tgctgatggg
     1141 aatgcgcccc ttatgctctg cccagtacga gaagatcttc aacaccacgc ggattccagg
     1201 ggtccaaaaa gactacatcc gccacctcca tgacagccaa cacgtggctg tcttccaccg
     1261 gggccgattc ttccgcatgg ggacccactc ccgaaacagc ctgctttccc cgagagccct
     1321 ggagcagcag tttcagagaa tcctggatga tccctcaccg gcctgccccc acgaggaaca
     1381 tctggcagct ctgacagctg ctcccagggg cacgtgggcc caggtgcgga catccctgaa
     1441 gacccaggca gcggaggccc tggaggcggt ggaaggggcc gctttctttg tgtcactgga
     1501 tgctgagccc gcggggctca ccagggagga cccggcagcg tcgttggatg cctacgccca
     1561 tgctctgctg gccggccggg gccatgatcg ctggtttgac aaatccttca ccctaatcgt
     1621 cttctctaac gggaagctgg gcctcagcgt ggagcactcc tgggccgact gccccatctc
     1681 aggacacatg tgggagttca ctctggctac agaatgcttt cagctgggct actcaacaga
     1741 cggccactgc aaggggcacc cggaccccac actaccccag ccccagcggc tgcaatggga
     1801 ccttccagac cagatccact cctccatctc tctagccctg aggggagcca agatcttgtc
     1861 tgaaaatgtc gactgccatg tcgttccatt ctccctattt ggcaagagct tcatccgacg
     1921 ctgccacctc tcttcagaca gcttcatcca gatcgccttg caactggccc acttccggga
     1981 caggggtcaa ttctgcctga cttatgagtc ggccatgact cgcttattcc tggaaggccg
     2041 gacggagacg gtgcggtctt gcacgaggga ggcctgcaac tttgtcaggg ccatggagga
     2101 caaagagaag acggacccac agtgcctcgc cctgttccgc gtggcagtgg acaagcacca
     2161 ggctctgctg aaggcagcca tgagcgggca gggagttgac cgccacctgt ttgcgctgta
     2221 catcgtgtcc cgattcctcc acctgcagtc gcccttcctg acccaggtcc attcggagca
     2281 gtggcagctg tccaccagcc agatccctgt tcagcaaatg catctgtttg acgtccacaa
     2341 ttacccggac tatgtttcct caggcggtgg attcgggcct gctgatgacc atggttatgg
     2401 tgtttcttat atcttcatgg gggatggcat gatcaccttc cacatctcca gcaaaaaatc
     2461 aagcacaaaa acggattccc acaggctggg gcagcacatt gaggacgcac tgctggatgt
     2521 ggcctccctg ttccaggcgg gacagcattt taagcgccgg ttcagagggt cagggaagga
     2581 gaactccagg cacaggtgtg gatttctctc ccgccagact ggggcctcca aggcctcaat
     2641 gacatccacc gacttctgac tccttccagc aggcagctgg cctctccaag gaataagggt
     2701 gaaattgcca cagctggctg acacaggaca ggggcaactg gtttggcaac cccacatcca
     2761 ggccaataaa gatgtgtgag ctgggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//