LOCUS BC029104 2817 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens carnitine palmitoyltransferase 1C, mRNA (cDNA clone MGC:9391 IMAGE:3872727), complete cds. ACCESSION BC029104 VERSION BC029104.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2817) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2817) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: l Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22748776. FEATURES Location/Qualifiers source 1..2817 /db_xref="H-InvDB:HIT000040679" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9391 IMAGE:3872727" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2817 /gene="CPT1C" /gene_synonym="CPTIC" /gene_synonym="FLJ23809" /db_xref="GeneID:126129" CDS 281..2659 /gene="CPT1C" /gene_synonym="CPTIC" /gene_synonym="FLJ23809" /codon_start=1 /product="CPT1C protein" /protein_id="AAH29104.1" /db_xref="GeneID:126129" /translation="MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLS RFWNDFLTGVFPASPLSWLFLFSAIQLAWFLQLDPSLGLMEKIKELLPDWGGQHHGLR GVLAAALFASCLWGALIFTLHVALRLLLSYHGWLLEPHGAMSSPTKTWLALVRIFSGR HPMLFSYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQASLLQ WYLRLKSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMAARAGNAVHALLLYRHRLN RQEIPPTLLMGMRPLCSAQYEKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMG THSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVRTSLKTQAAE ALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSN GKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQPQRLQWDL PDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQLAHFR DRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVD KHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFLTQVHSEQWQLSTSQIPVQQMHL FDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHI EDALLDVASLFQAGQHFKRRFRGSGKENSRHRCGFLSRQTGASKASMTSTDF" misc_feature 788..2527 /gene="CPT1C" /gene_synonym="CPTIC" /gene_synonym="FLJ23809" /note="Carn_acyltransf; Region: Choline/Carnitine o-acyltransferase" /db_xref="CDD:pfam00755" BASE COUNT 564 a 878 c 794 g 581 t ORIGIN 1 ggaatcgggg tttctgggtg acggtgatct cggggtgggc aggactccaa aggcccgtcg 61 acccggtggt ggactccttg cactgggatt ggacatatgc aagcgggaga tttggggccg 121 gcgctcaaaa tcggggggcg ggggtggact cgggtttgga ccccaggatc cgatcagcgg 181 acccttgatt caacgtgagg tcccgaattg acgtccttcc ctcaaaacct ccgggtctac 241 aaaccaggac cctcaagacc cttcagggct ccagcgtgac atggctgaag cgcaccaggc 301 cgtgggcttc cgaccctcgc tgacctcgga cggggctgaa gtggaactca gtgcccctgt 361 gctgcaggag atctacctct ctggcctgcg ctcctggaaa aggcatctct cacgtttctg 421 gaatgacttt ctcaccggtg tgtttcctgc cagccccctc agttggcttt tcctcttcag 481 tgccatccag cttgcctggt tcctccagct ggatccttcc ttaggactga tggagaagat 541 caaagagttg ctgcctgact ggggtggaca acaccacggg ctccgggggg tcctggcagc 601 cgcgctgttt gcctcgtgtt tgtggggagc cctgatcttc acactgcacg tggccctgag 661 gctgcttctg tcctaccacg gctggcttct tgagccccac ggagccatgt cctcccccac 721 caagacctgg ctggccctgg tccgcatctt ctctggccgc cacccgatgc tgttcagtta 781 ccagcgctcc ctgccacgcc agcccgtgcc ctctgtgcag gacaccgtgc gcaagtacct 841 ggagtcggtc cggcccatcc tctccgacga ggacttcgac tggaccgcgg tcctggcgca 901 ggaattcctg aggctgcagg cgtcgctgct gcagtggtac ctgcggctca agtcctggtg 961 ggcgtccaat tatgtcagtg actggtggga ggaatttgtg tacctgcgct cccgaaatcc 1021 gctgatggtg aacagcaact attacatgat ggcagctcgc gctgggaatg ccgtccatgc 1081 cctcctcctg taccgccacc gcctgaaccg ccaggagata cccccgactt tgctgatggg 1141 aatgcgcccc ttatgctctg cccagtacga gaagatcttc aacaccacgc ggattccagg 1201 ggtccaaaaa gactacatcc gccacctcca tgacagccaa cacgtggctg tcttccaccg 1261 gggccgattc ttccgcatgg ggacccactc ccgaaacagc ctgctttccc cgagagccct 1321 ggagcagcag tttcagagaa tcctggatga tccctcaccg gcctgccccc acgaggaaca 1381 tctggcagct ctgacagctg ctcccagggg cacgtgggcc caggtgcgga catccctgaa 1441 gacccaggca gcggaggccc tggaggcggt ggaaggggcc gctttctttg tgtcactgga 1501 tgctgagccc gcggggctca ccagggagga cccggcagcg tcgttggatg cctacgccca 1561 tgctctgctg gccggccggg gccatgatcg ctggtttgac aaatccttca ccctaatcgt 1621 cttctctaac gggaagctgg gcctcagcgt ggagcactcc tgggccgact gccccatctc 1681 aggacacatg tgggagttca ctctggctac agaatgcttt cagctgggct actcaacaga 1741 cggccactgc aaggggcacc cggaccccac actaccccag ccccagcggc tgcaatggga 1801 ccttccagac cagatccact cctccatctc tctagccctg aggggagcca agatcttgtc 1861 tgaaaatgtc gactgccatg tcgttccatt ctccctattt ggcaagagct tcatccgacg 1921 ctgccacctc tcttcagaca gcttcatcca gatcgccttg caactggccc acttccggga 1981 caggggtcaa ttctgcctga cttatgagtc ggccatgact cgcttattcc tggaaggccg 2041 gacggagacg gtgcggtctt gcacgaggga ggcctgcaac tttgtcaggg ccatggagga 2101 caaagagaag acggacccac agtgcctcgc cctgttccgc gtggcagtgg acaagcacca 2161 ggctctgctg aaggcagcca tgagcgggca gggagttgac cgccacctgt ttgcgctgta 2221 catcgtgtcc cgattcctcc acctgcagtc gcccttcctg acccaggtcc attcggagca 2281 gtggcagctg tccaccagcc agatccctgt tcagcaaatg catctgtttg acgtccacaa 2341 ttacccggac tatgtttcct caggcggtgg attcgggcct gctgatgacc atggttatgg 2401 tgtttcttat atcttcatgg gggatggcat gatcaccttc cacatctcca gcaaaaaatc 2461 aagcacaaaa acggattccc acaggctggg gcagcacatt gaggacgcac tgctggatgt 2521 ggcctccctg ttccaggcgg gacagcattt taagcgccgg ttcagagggt cagggaagga 2581 gaactccagg cacaggtgtg gatttctctc ccgccagact ggggcctcca aggcctcaat 2641 gacatccacc gacttctgac tccttccagc aggcagctgg cctctccaag gaataagggt 2701 gaaattgcca cagctggctg acacaggaca ggggcaactg gtttggcaac cccacatcca 2761 ggccaataaa gatgtgtgag ctgggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //