LOCUS BC029044 2481 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stanniocalcin 1, mRNA (cDNA clone MGC:34539
IMAGE:5191420), complete cds.
ACCESSION BC029044
VERSION BC029044.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2481)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2481)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676083.
FEATURES Location/Qualifiers
source 1..2481
/db_xref="H-InvDB:HIT000040665"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34539 IMAGE:5191420"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2481
/gene="STC1"
/db_xref="GeneID:6781"
/db_xref="HGNC:HGNC:11373"
/db_xref="MIM:601185"
CDS 263..1006
/gene="STC1"
/codon_start=1
/product="stanniocalcin 1"
/protein_id="AAH29044.1"
/db_xref="GeneID:6781"
/db_xref="HGNC:HGNC:11373"
/db_xref="MIM:601185"
/translation="MLQNSAVLLVLVISASATHEAEQNDSVSPRKSRVAAQNSAEVVR
CLNSALQVGCGAFACLENSTCDTDGMYDICKSFLYSAAKFDTQGKAFVKESLKCIANG
VTSKVFLAIRRCSTFQRMIAEVQEECYSKLNVCSIAKRNPEAITEVVQLPNHFSNRYY
NRLVRSLLECDEDTVSTIRDSLMEKIGPNMASLFHILQTDHCAQTHPRADFNRRRTNE
PQKLKVLLRNLRGEEDSPSHIKRTSHESA"
BASE COUNT 745 a 599 c 520 g 617 t
ORIGIN
1 caagaagcag cgactgcagc agcagcagca gcagcggcgg tggcagcagc agcagcagcg
61 gcggcagcag cagcagcagc ggaggcaccg gtggcagcag cagcatcacc agcaacaaca
121 acaaaaaaaa atcctcatca aatcctcacc taagctttca gtgtatccag atccacatct
181 tcactcaagc caggagaggg aaagaggaaa ggggggcagg aaaaaaaaaa aacccaacaa
241 cttagcggaa acttctcaga gaatgctcca aaactcagca gtgcttctgg tgctggtgat
301 cagtgcttct gcaacccatg aggcggagca gaatgactct gtgagcccca ggaaatcccg
361 agtggcggct caaaactcag ctgaagtggt tcgttgcctc aacagtgctc tacaggtcgg
421 ctgcggggct tttgcatgcc tggaaaactc cacctgtgac acagatggga tgtatgacat
481 ctgtaaatcc ttcttgtaca gcgctgctaa atttgacact cagggaaaag cattcgtcaa
541 agagagctta aaatgcatcg ccaacggggt cacctccaag gtcttcctcg ccattcggag
601 gtgctccact ttccaaagga tgattgctga ggtgcaggaa gagtgctaca gcaagctgaa
661 tgtgtgcagc atcgccaagc ggaaccctga agccatcact gaggtcgtcc agctgcccaa
721 tcacttctcc aacagatact ataacagact tgtccgaagc ctgctggaat gtgatgaaga
781 cacagtcagc acaatcagag acagcctgat ggagaaaatt gggcctaaca tggccagcct
841 cttccacatc ctgcagacag accactgtgc ccaaacacac ccacgagctg acttcaacag
901 gagacgcacc aatgagccgc agaagctgaa agtcctcctc aggaacctcc gaggtgagga
961 ggactctccc tcccacatca aacgcacatc ccatgagagt gcataaccag ggagaggtta
1021 ttcacaacct caccaaacta gtatcatttt aggggtgttg acacaccagt tttgagtgta
1081 ctgtgcctgg tttgattttt ttaaagtagt tcctattttc tatccccctt aaagaaaatt
1141 gcatgaaact aggcttctgt aatcaatatc ccaacattct gcaatggcag cattcccacc
1201 aacaaaatcc atgtgaccat tctgcctctc ctcaggagaa agtaccctct tttaccaact
1261 tcctctgcca tgtttttccc ctgctcccct gagaccaccc ccaaacacaa aacattcatg
1321 taactctcca gccattgtaa tttgaagatg tggatccctt tagaacggtt gccccagtag
1381 agttagctga taaggaaact ttatttaaat gcatgtctta aatgctcata aagatgttaa
1441 atggaattcg tgttatgaat ctgtgctggc catggacgaa tatgaatgtc acatttgaat
1501 tcttgatctc taatgagcta gtgtcttatg gtcttgatcc tccaatgtct aattttcttt
1561 ccgacacatt taccaaattg cttgagcctg gctgtccaac cagactttga gcctgcatct
1621 tcttgcatct aatgaaaaac aaaaagctaa catctttacg tactgtaact gctcagagct
1681 ttaaaagtat ctttaacaat tgtcttaaaa ccagagaatc ttaaggtcta actgtggaat
1741 ataaatagct gaaaactaat gtactgtaca taaattccag aggactctgc ttaaacaaag
1801 cagtatataa taactttatt gcatatagat ttagttttgt aacttagctt tatttttctt
1861 ttcctgggaa tggaataact atctcacttc cagatatcca cataaatgct ccttgtggcc
1921 ttttttataa ctaagggggt agaagtagtt ttaattcaac atcaaaactt aagatgggcc
1981 tgtatgagac aggaaaaacc aacaggttta tctgaaggac cccaggtaag atgttaatct
2041 cccagcccac ctcaacccag aggctactct tgacttagac ctatactgaa agatctctgt
2101 cacatccaac tggaaattcc aggaaccaaa aagagcatcc ctatgggctt ggaccactta
2161 cagtgtgata aggcctacta tacattagga agtggcagtt ctttactcgt cccctttcat
2221 cggtgcctgg tactctggca aatgatgatg gggtgggaga ctttccatta aatcaatcag
2281 gaatgagtca atcagccttt aggtctttag tccgggggac ttggggctga gagagtataa
2341 ataaccctgg gctgtccagc cttaatagac ttctcttaca ttttcgtcct gtagcacgct
2401 gcctgccaaa gtagtcctgg cagctggacc atctctgtag gatcgtaaaa aaatagaaaa
2461 aaaaaaaaaa aaaaaaaaaa a
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