LOCUS BC029042 2246 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PDZ domain containing 3, mRNA (cDNA clone MGC:34160 IMAGE:5186364), complete cds. ACCESSION BC029042 VERSION BC029042.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2246) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2246) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: g Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21630284. FEATURES Location/Qualifiers source 1..2246 /db_xref="H-InvDB:HIT000040664" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34160 IMAGE:5186364" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2246 /gene="PDZD3" /gene_synonym="FLJ22756" /gene_synonym="IKEPP" /db_xref="GeneID:79849" /db_xref="HGNC:HGNC:19891" /db_xref="MIM:607146" CDS 10..1485 /gene="PDZD3" /gene_synonym="FLJ22756" /gene_synonym="IKEPP" /codon_start=1 /product="PDZ domain containing 3" /protein_id="AAH29042.1" /db_xref="GeneID:79849" /db_xref="HGNC:HGNC:19891" /db_xref="MIM:607146" /translation="MEKAADLQDTASLTLKFKFNPKLGIDNPVLSLAEDHDPYDPWSL ERPRFCLLSKEEGKSFGFHLQQELGRAGHVVCRVDPGTSAQRQGLQEGDRILAVNNDV VEHEDYAVVVRRIRASSPRVLLTVLARHAHDVARAQLGEDAHLCPTLGPGVRPRLCHI VKDEGGFGFSVTHGNQGPFWLVLSTGGAAERAGVPPGARLLEVNGLWQSGQQVTLLVA GPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFLLREEKGLDGRPGQF LWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEAD RFFSMVRLSPLLFLENTEAPASPQGSSSASLVETEDPSLEDTSVPSVPLGSRQCFLYP GPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEVNGYPVGGQNDLERL QQLPEAEPPLCLKLAARSLRGLEAWIPPGAAEDWALASDLL" BASE COUNT 500 a 579 c 709 g 458 t ORIGIN 1 gatccagcta tggagaaagc cgcagatctg caggacacag cctcgttaac tctgaagttt 61 aagtttaacc caaagctggg cattgataat cctgtcctct ccctggccga agaccacgac 121 ccctatgatc cctggagcct ggagcggcct cgcttctgtt tactgagcaa agaggagggc 181 aagagttttg gcttccacct gcagcaggag ctgggcaggg ctgggcatgt ggtgtgcagg 241 gtggacccag gcacctctgc ccagcgccag ggtcttcagg aaggagacag gatcctggcg 301 gtgaacaatg atgttgtgga acacgaagac tatgcggtgg tggtacgccg catccgggcc 361 agcagccctc gggtgttgct gacagtattg gcacggcatg cacatgacgt ggcccgagct 421 cagctgggag aagatgccca cctctgtccc accctaggcc caggggtccg gccccggctg 481 tgccacatag tgaaagatga gggtggtttt ggcttcagtg tcacccatgg caatcagggt 541 cctttctggt tggtgctaag tactggagga gcagctgagc gggcaggggt gccccccggg 601 gcccggctgc tggaagtgaa tgggctttgg cagagtggac agcaggtgac cttgctggtg 661 gcagggccag aggtggaaga acagtgtcgc cagctgggat tgcccctggc tgcacccctg 721 gcagagggct gggcactgcc caccaagccc cgctgcctgc acctggagaa agggccccag 781 ggttttgggt tcctgctccg ggaggaaaag ggccttgacg gtcgccctgg acagttcctg 841 tgggaggtgg acccgggact gccagccaag aaggctggga tgcaggctgg ggaccggctg 901 gtggctgtgg ctggggagag cgtggagggg ctgggccatg aggagacagt gtccaggatc 961 caggggcagg gctcctgtgt ctccctcact gtcgtcgacc ctgaggcgga ccgcttcttc 1021 agcatggttc gcctgtcccc actcctcttc ttggagaaca cagaggctcc cgcctcgccc 1081 cagggcagca gctcagcctc actggttgag acagaggacc cttcacttga agacacaagc 1141 gtgccttctg tccctcttgg ctcccgacag tgcttcctgt accctgggcc tggtggcagc 1201 tatggcttcc gactcagttg tgtggccagt gggcctcgtc tcttcatctc ccaggtgact 1261 ccaggaggct cagctgcccg ggctgggctg caagtgggag acgtgattct ggaagtgaac 1321 gggtatcctg ttgggggaca gaatgacctg gagaggcttc agcagctgcc tgaggctgag 1381 ccacccctct gcctgaagct ggcagccagg tctctgcggg gcttggaagc ctggattccc 1441 cctggggctg cagaggactg ggctctggcc tcggatctac tgtagagcac ccctgcttgg 1501 tacagacata ctcaggggct accgtgtctt cactctccag cctgaggtgg tgaaggcagg 1561 atgctctctc taagccagac cagagggact cagacaccac cgatcacagg ctggcccagg 1621 tgctccctcc cttcctgcag gcccacctgc cagcagaggg tgtggttgga ggcctcagac 1681 aggtccctga aggagtctga ggctccagag gatgtcatat gggagtttta gagagctgtg 1741 tcccaaggat gaaggtgtgg ctgtgggtct ggctaggatt gaagccatct ggaccttttc 1801 tagatatgac tccaggaccc ttgagtgtaa tgcaaaaatt tggagaccag ctatgcctgc 1861 cctctgtggg tgccttagca ttgcgggagg gtggtgcttg gtcaccgttg catttgttat 1921 agaaatggcc attcgccata aatctgactg cctgtgtttg tgttggtggg ggtaaggggc 1981 agtggtgtga agggaccaaa agggcctcag gctcaagggg tgggatgcgg ctcctgcagg 2041 agagaggttg agacctggtc aaatttattt cctatcaatc actgaatctc agggataatg 2101 ggtcaaccca gaactgagat gtctgtatga cagccactcc taaaaataaa caacaacaaa 2161 aacaaaaaaa gaagaaaact aaataaaaat aaaaataaaa ataaaaaaaa aaaaaaaaaa 2221 aaaaaaaaaa aaaaaaaaaa aaaaaa //