LOCUS BC028986 2873 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens UBX domain protein 7, mRNA (cDNA clone IMAGE:4539993),
partial cds.
ACCESSION BC028986
VERSION BC028986.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2873)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2873
/db_xref="H-InvDB:HIT000091678"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4539993"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2873
/gene="UBXN7"
/db_xref="GeneID:26043"
/db_xref="HGNC:HGNC:29119"
CDS <1..1377
/gene="UBXN7"
/codon_start=1
/product="UBXN7 protein"
/protein_id="AAH28986.1"
/db_xref="GeneID:26043"
/db_xref="HGNC:HGNC:29119"
/translation="KHMLEACNNNLEMAVTMFLDGGGIAEEPSTSSASVSTVRPHTEE
EVRAPIPQKQEILVEPEPLFGAPKRRRPARSIFDGFRDFQTETIRQEQELRNGGAIDK
KLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNE
AVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSS
FLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQETHFDSTQ
TKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRP
LTEPPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYPDGK
REQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYDITLQEAGLCPQE
TVFVQERN"
BASE COUNT 830 a 593 c 631 g 819 t
ORIGIN
1 aaacatatgc ttgaagcgtg caacaataat ctggaaatgg cagtcactat gtttttggat
61 ggtggaggaa tcgctgaaga gcccagtacc agttcagcaa gtgtctctac tgtcagacca
121 cacacagaag aagaagttcg tgccccaatt cctcaaaagc aggaaatact ggtggaacca
181 gaaccattat ttggtgctcc taaaagacga cggcctgcac gttcaatttt tgatggtttc
241 cgggattttc agactgaaac tattcggcaa gaacaagaat taagaaatgg aggagctatc
301 gataagaaat taactaccct tgcagatcta ttccggccac ccattgattt gatgcataaa
361 ggcagctttg aaacagccaa agagtgtggc cagatgcaaa ataagtggct gatgataaac
421 attcaaaatg ttcaagactt tgcatgtcag tgcctcaacc gcgatgtgtg gagcaacgaa
481 gctgtgaaga atattatccg ggaacatttc attttctggc aggtttatca tgacagtgag
541 gaaggtcaga gatacataca gttttataag ttaggggatt tcccctatgt ttccatattg
601 gacccacgga caggtcagaa gctagtagaa tggcaccagt tagatgtatc ttctttcttg
661 gaccaagtga cgggatttct gggtgaacat ggacaactgg atggactttc tagcagtccc
721 cccaaaaaat gtgcccgttc agagagcctt atagatgcaa gtgaagacag ccagctagaa
781 gctgccatca gagcctcctt acaagaaaca cattttgatt caacacagac aaaacaggat
841 agccgctcag atgaagaatc tgaatctgaa cttttttctg gcagtgagga gttcatatcc
901 gtttgtggct ctgatgaaga agaagaggta gagaatcttg ccaagtccag aaagtctccc
961 cacaaagatt tggggcatag aaaagaggag aatagaaggc cgctgactga gccaccagtc
1021 agaactgatc ctggaacagc cacaaaccac caaggattgc cagctgtgga ttcagagata
1081 ctggagatgc cacctgaaaa agcagatgga gtagtggagg ggatagatgt aaatggacca
1141 aaagcacagc tgatgttgcg gtatccagat ggaaaaaggg aacagatcac tcttccagag
1201 caagctaaac tgctagcttt ggtgaagcac gtgcagtcta aaggataccc aaatgaacgt
1261 tttgaacttc tcaccaactt tcctcgaagg aaattatctc atctggacta tgatattaca
1321 ttgcaagagg caggcctttg tcctcaagag actgtctttg tacaggaaag aaattaacac
1381 catggcttga cctctctcag cttacccctt ttttcccttt tcctgtgaga tacatgtcac
1441 taagtatgca ttttggctca taggaccaca gagccaaagt tgggcaagca agtcaccttc
1501 cttctcttat ttcttgatct ctcctataat cagtctcttt ctcccccttt gtttctttct
1561 cctcttctgt tttctcgctc cccactccgt acccttctgc ctccccctcc ccccacactt
1621 ttctttctta cctaatctgg tgaccaaact gaagtgtaag gataagacct ctcctagtac
1681 tagcagcagg aattgtgtgt tccagtaagt ggtctcttgc acggcacttt tttgggatca
1741 aatgttaacg ttactcccca gactcttcgg gcaaaggaat ggctagattc agagtaagaa
1801 caaccctccc tttttttgta agtccccgtg tttagcaggg agaagaaatt ctctaacatg
1861 ggtttggttt tgttgtgttc ttcatgtgga aatgtcgctt aacaaaatat ccaggctttt
1921 gtttacgtgg aaaaagcatc ccttgtaatg attgctcatc atacttaaaa acctttttca
1981 aaggattttc atgttcccag ctataaggac tatttccatg acatgtgtta ttggcagaat
2041 gagtgttaaa tatggagcat atagcatggg gtgactttca ttgtcctaac ctgagacagt
2101 tttccttatt actctgtatt gatcctgcta gtccaagaat ggacatgaag tgaacctatc
2161 gtggtgactg ggataggaag gtgcttgcta tttttgccag cacagcatat tagttccttt
2221 ggagccctcc attgtctgag tctgcagtga tctgtaggaa ggcagctggt caataatcat
2281 gtagtacaat ggcttggaat tgtaaccact atggttattg attgtcctgt gttgtttcag
2341 gcatacttag gtatgtccct ggggaaaaag aaaaccattc agctgagagt tgctaaccat
2401 gttcttttgg ttagaaataa tggttcattt tttgcccctg gttggaatag tctctaaaag
2461 gctctggtga ctgaattgaa catgagtccg catgctgttt tctttcaaaa ggtatcaaaa
2521 cggaaagcct ctctaagggg aagacctttc aactccattc agaagacaac atttagtaag
2581 gaggatggcg gaggttacta gtaattttca gatgtcttgg gctttttctg ccaacaaaac
2641 ccaaaatcaa attagagttg gtgaaagctt tcttcagtgt ttttagaaga ggccatcttg
2701 aatctgtaga ataccattta cacatcaact tcaccctatg ctcatttcgt attttgagct
2761 taaatggagt cctctgaagg gggggtagtc gtgattctgg tggcaaaact agaactttta
2821 acttgtaaaa tgaaaaatat taaatggacc tttttgtcaa aaaaaaaaaa aaa
//