LOCUS BC028912 1918 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 9, mRNA
(cDNA clone MGC:24877 IMAGE:4943933), complete cds.
ACCESSION BC028912
VERSION BC028912.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1918)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1918)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9558754.
FEATURES Location/Qualifiers
source 1..1918
/db_xref="H-InvDB:HIT000040644"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24877 IMAGE:4943933"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1918
/gene="DNAJB9"
/gene_synonym="DKFZP564F1862"
/gene_synonym="ERdj4"
/gene_synonym="MST049"
/gene_synonym="MSTP049"
/db_xref="GeneID:4189"
/db_xref="HGNC:HGNC:6968"
/db_xref="MIM:602634"
CDS 184..855
/gene="DNAJB9"
/gene_synonym="DKFZP564F1862"
/gene_synonym="ERdj4"
/gene_synonym="MST049"
/gene_synonym="MSTP049"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily B, member 9"
/protein_id="AAH28912.1"
/db_xref="GeneID:4189"
/db_xref="HGNC:HGNC:6968"
/db_xref="MIM:602634"
/translation="MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKK
AFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRG
SGSSFEQSFNFNFDDLFKDFGFFGQNQNTGSKKRFENHFQTRQDGGSSRQRHHFQEFS
FGGGLFDDMFEDMEKMFSFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYT
DCSGQ"
BASE COUNT 580 a 333 c 391 g 614 t
ORIGIN
1 gggcgccggc ggggaaggag gagcgctagg tcggtgtacg accgagatta gggtgcgtgc
61 cagctccggg aggccgcggt gaggggccgg gcccaagctg ccgacccgag ccgatcgtca
121 gggtcgccag cgcctcagct ctgtggagga gcagcagtag tcggagggtg caggatatta
181 gaaatggcta ctccccagtc aattttcatc tttgcaatct gcattttaat gataacagaa
241 ttaattctgg cctcaaaaag ctactatgat atcttaggtg tgccaaaatc ggcatcagag
301 cgccaaatca agaaggcctt tcacaagttg gccatgaagt accaccctga caaaaataag
361 agcccggatg ctgaagcaaa attcagagag attgcagaag catatgaaac actctcagat
421 gctaatagac gaaaagagta tgatacactt ggacacagtg cttttactag tggtaaagga
481 caaagaggta gtggaagttc ttttgagcag tcatttaact tcaattttga tgacttattt
541 aaagactttg gcttttttgg tcaaaaccaa aacactggat ccaagaagcg ttttgaaaat
601 catttccaga cacgccagga tggtggttcc agtagacaaa ggcatcattt ccaagaattt
661 tcttttggag gtggattatt tgatgacatg tttgaagata tggagaaaat gttttctttt
721 agtggttttg actctaccaa tcagcataca gtacagactg aaaatagatt tcatggatct
781 agcaagcact gcaggactgt cactcaacga agaggaaata tggttactac atacactgac
841 tgttcaggac agtagttctt attctattct cactaaatcc aactggttga ctcttcctca
901 ttatctttga tgctaaacaa ttttctgtga actattttga caagtgcatg atttcacttt
961 aaacaatttg atatagctat taaatatatt taagggtttt ttttttttga caaattcaac
1021 attcaacgag tagacaaaat gctaattatt tccctgatta ggaaagtttc tttaaaaaac
1081 acgtaatttt gcctagtgct ttttctctac ctgcccttgg gctcactaat atcaccagta
1141 ttattaccaa gaaaatattg agtttacctg attaaacttt aaaagttaat tgtagattta
1201 aattgtgtga acctaatgat ttttgcagtg aaacctttac taattcaaag ttgcatgttc
1261 tatgacatct gtgacttgcg ttgcagagtg tacatgaaac tgtataattg agtcattcag
1321 taaaggagaa cagtatcttg gttaattgct actgaaaggt tgagaaagga atggtttgat
1381 atttaccaca gcgctgtgcc tttctacagt agaactgggg taaaggaaat ggttttattg
1441 cccatagtca tttaggctgg aaaaaagttg aaaacttaac gaaatattgc caagagattg
1501 ttatgtgttt ggttccagcc taaaaatgat tttgtagtgt tgaaatcata gctacttaca
1561 tagctttttc atatttcttt cttagttgtt ggcactctta ggtcttagta tggatttatg
1621 tgtttgtgtg tgtgtagttt atcctctctc tcatctttat ctagagattg actgatacct
1681 cattctgttt gtaaaaccag ccagtaattt ctgtgcaacc ttactatgtg caatattttt
1741 aaatcctgag aaatgtgtgc ttttgttttc ggatagactt atttctttag ttctgcactt
1801 ttccacatta tactccatat gagtattaat cctatggata catattaaaa caagtgtctc
1861 atacaacatt gtatgtgaga gaaatataaa tatttacaac ctgaaaaaaa aaaaaaaa
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