LOCUS BC028909 1852 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin-like 8, mRNA (cDNA clone MGC:24924
IMAGE:4933032), complete cds.
ACCESSION BC028909
VERSION BC028909.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1852)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1852)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698756.
FEATURES Location/Qualifiers
source 1..1852
/db_xref="H-InvDB:HIT000040643"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24924 IMAGE:4933032"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1852
/gene="ACTL8"
/db_xref="GeneID:81569"
/db_xref="HGNC:HGNC:24018"
CDS 181..1281
/gene="ACTL8"
/codon_start=1
/product="actin-like 8"
/protein_id="AAH28909.1"
/db_xref="GeneID:81569"
/db_xref="HGNC:HGNC:24018"
/translation="MASRTVIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGP
SYARRRVSLGIDICHPDTFSYPIERGRILNWEGVQYLWSFVLENHRREQEVPPVIITE
TPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPF
HQGRPLPASGKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQLETVAVTQMNKCYVPQNL
GEALDFRERQQSALDESNTYQLPDGSRVELTPMQRVAPEMFFSPQVFEQPGPSIPRAI
VESVESCEISLRPLLVSHVMACGGNTLYPGFTKRLFRELMGDHVSSTKATVWEGSNRN
FSVWLGASVVAHLSTYQSEWMSREEYGEHMRM"
BASE COUNT 372 a 484 c 544 g 452 t
ORIGIN
1 caccacgtgc agccgctctc gtgcaggcgt ttgcagtgtg cagctgagtt cggcagctca
61 cacagcaccc ctttcaagtt gttttgcagt gggtgcctct tgtgagacac tgtttctgag
121 agcagctttt gtggcatctt acagggcaga tttctggtcc cacccacctc tgcctccgcc
181 atggcttcaa gaaccgttat cattgaccac gggtctggct ttttgaaggc tggcacggcc
241 ggatggaatg agcctcagat ggtcttcccg aacatcgtga actacctacc gtgcaaggag
301 aaccctggcc ccagctatgc ccgtaggcgt gtgagcctgg gcatcgacat ttgccatcct
361 gacaccttta gctaccccat cgagcggggc cgcatcctca actgggaggg tgtgcagtac
421 ctctggtcat ttgtgttgga gaaccacaga cgggagcaag aggtcccccc tgtgatcatc
481 acggagacac ccttgaggga gcctgcggac cgaaagaaga tgctggagat cctgtttgag
541 ttgctgcatg tcccatcggt cctcctggcc gaccagctgc agatgtccct gtatgcctct
601 ggcctcctga ccggagtggt ggttgattct ggctatggcc tgacccgcgt gcagcctttc
661 caccagggcc gccccttgcc cgccagcggc aagacgctgg agttcgccgg ccaggatctc
721 tccgcctatc tcctcaagag tctctttaag gaagattgcg atagacgctg cctgtttcag
781 ctggagacag tcgccgtgac tcagatgaac aagtgctacg tgccgcagaa tctgggggag
841 gccctggact ttcgtgagag gcagcagagt gccttggatg agagcaacac ctatcagctc
901 ccagacggct cccgcgtgga gctgaccccc atgcagcggg tggctcctga gatgttcttt
961 agcccgcagg tgttcgagca gccggggccc agcatcccac gggccattgt ggaatccgtg
1021 gagtcctgcg agatctccct gcgccccctg ctggtctccc acgtgatggc ctgcgggggc
1081 aacaccctct atcccgggtt cacaaagcgc ctgttcaggg agctgatggg ggatcacgtc
1141 tcctccacca aggccacagt ctgggagggt tccaatagaa actttagtgt ctggctagga
1201 gcgtccgtgg tggctcacct ttctacctac cagtctgagt ggatgtcccg agaggagtat
1261 ggtgagcata tgaggatgtg accctactgg ctcactcctg agaatgggct cctgttagat
1321 gggcacgggc ggattaattt tagcaaaatg ttctgggtgg gggtagaatg aggtggggtg
1381 gggtgagctg gctttggaat tctaggggca tgagggtatt ttttaggttc taaggtttta
1441 tcttgttgca agagtgggac ctacccaagg gggaagacaa gatgtcatcc ttggaaaccc
1501 tgcaggggac agtttttcca gggtggccta tcattggggt atgagtggct gactgccatc
1561 tccatgcctg agagccactg atttttcatt ggcatttccc ctggtttgtc tcattcttct
1621 tggttgagta ggttttaact ggggtagcac tcctgctagg agtcccaatt atttttgact
1681 aggggatggg ggacagttga catttctggt cctacaggcc ctttctggcc agggaggcat
1741 tgctgcaggt gagcctggga tgcccttgcc acccgtggtt ggatcttgtt ttatatctgc
1801 aaataaatag cttgtttgga agcaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//