LOCUS BC028741 1776 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation-like factor 6 interacting protein 6,
mRNA (cDNA clone MGC:33864 IMAGE:5263418), complete cds.
ACCESSION BC028741
VERSION BC028741.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1776)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1776)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC028741.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059759.
FEATURES Location/Qualifiers
source 1..1776
/db_xref="H-InvDB:HIT000040636"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33864 IMAGE:5263418"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1776
/gene="ARL6IP6"
/gene_synonym="MGC33864"
/gene_synonym="PFAAP1"
/db_xref="GeneID:151188"
/db_xref="HGNC:HGNC:24048"
CDS 13..693
/gene="ARL6IP6"
/gene_synonym="MGC33864"
/gene_synonym="PFAAP1"
/codon_start=1
/product="ADP-ribosylation-like factor 6 interacting
protein 6"
/protein_id="AAH28741.1"
/db_xref="GeneID:151188"
/db_xref="HGNC:HGNC:24048"
/translation="MSFAESGWRSALRRRGPGTPGPVARPSYSSFTQGDSWGEGEVDE
EEGCDQVARDLRAEFSAGAWSEPRKRSVLPPDGNGSPVLPDKRNGIFPAAAGSRAQPR
RWPVQVLSILCSLLFAILLAFLLAIAYLIVKELHAENLKNEDDVDTGLLGFWTLLIIS
LTAGFSCCSFSWTVTYFDSFEPGMFPPTPLSPARFKKLTGHSFHMGYSMAILNGIVAA
LTVAWCLM"
BASE COUNT 498 a 328 c 344 g 606 t
ORIGIN
1 gtttttcgcg ccatgtcgtt tgctgagagc gggtggcggt cggctctgcg gcgccgcggt
61 cccggcaccc cgggccctgt ggctcggcca tcgtattcct cctttactca gggggacagc
121 tggggtgaag gcgaagtcga cgaggaggag ggatgcgacc aagtggcccg cgacctgcgg
181 gcggagttct cggctggggc gtggtcagag cccagaaagc gctcggtgct cccgccggac
241 gggaacgggt cgcccgttct gcccgataag cgcaatggta tctttcccgc ggccgcgggc
301 agcagagccc agcctcggcg gtggccggtc caggtcctct ctattctctg ctcgctgctc
361 ttcgccattc ttctcgcctt cctcctcgcc atcgcctact tgatcgttaa agagttgcat
421 gctgagaatt tgaaaaatga agatgatgta gacactggac tattaggatt ctggactcta
481 cttataatat ccctaactgc tggattctcc tgttgcagct tttcttggac agtgacttac
541 tttgattctt ttgaaccagg aatgtttcct cctactcctc tttcacctgc caggttcaag
601 aaactgactg gacattcttt ccacatgggc tatagcatgg cgattttgaa tggcatcgta
661 gctgctctta ctgtagcatg gtgcctcatg taaacccaca ctggagcgat attgttggca
721 aaacttaatc atgattgttt tgtaataaca agaaggagca tcactgtcta ctcagaagac
781 tgagaaacct gctgttcatt atgtagttca gatatttatc acaatcatcc tcattatgga
841 agacctttta aagcattgtt ttagaatgtc tgagtattaa gatacagatt aattgggaat
901 atctgagtat taagtacttt cttcagagta taagatgttt acctcatctt tttacttttg
961 tgtgtgtagt tctttcaagt tgtaggaaac attttaatgg aatttaaact caaacttgaa
1021 tacaggacaa tgcttgcctt ttcatgtatg tactacattt tttgctaaga aatactgata
1081 tttctgttta gttgagctag aaatacttct tatttataca tttaggaaag caaataatgc
1141 ctactactcc gacttttata gaagctactt ttaaatcaga atatttaatt tttgatattc
1201 atataattaa tagaagttgc atttatattt tttatggggc atagttcctt atgtgttttt
1261 ttaatgtatt ttcatactac atactgaatt tgtatgtttt taaaattgtt acatctagac
1321 aactgtaaac attatttttt tagctagtgc aaacctagta cctgccattt ttactaattt
1381 ttgtctttaa aaaaagcaaa aaagcacatt gacctaagtt gaaaattaag taagtttatt
1441 tttaacaaaa aatgcctgaa aaaagctaaa ttatttaagt cattaagata ttgagaaaaa
1501 atttgaaatt tttactattt ctgtttccac aattccaaat atttatcttg gtgtatatat
1561 tgttacttta acagaacttg cattattttg tttttaataa atataaacat gaaatttttg
1621 tatgtgagaa tgattgaact agtttgttct taatctcaaa aatttagtta ccaaagtaga
1681 aaaggtattt tgatactaga tattaaaaac tacatatagt taatataatt ttataatttt
1741 tgtaattaaa tgtgcttctg caaaaaaaaa aaaaaa
//