LOCUS BC028723 2423 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens casein kinase 1, alpha 1-like, mRNA (cDNA clone
MGC:33182 IMAGE:5266487), complete cds.
ACCESSION BC028723
VERSION BC028723.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2423)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028723.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222183.
FEATURES Location/Qualifiers
source 1..2423
/db_xref="H-InvDB:HIT000040626"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33182 IMAGE:5266487"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2423
/gene="CSNK1A1L"
/gene_synonym="MGC33182"
/gene_synonym="RP11-532O21.2"
/db_xref="GeneID:122011"
/db_xref="HGNC:HGNC:20289"
CDS 411..1424
/gene="CSNK1A1L"
/gene_synonym="MGC33182"
/gene_synonym="RP11-532O21.2"
/codon_start=1
/product="casein kinase 1, alpha 1-like"
/protein_id="AAH28723.1"
/db_xref="GeneID:122011"
/db_xref="HGNC:HGNC:20289"
/translation="MTNNSGSKAELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEEVA
VKLESQKVKHPQLLYESKLYTILQGGVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFN
FCSRRFTMKTVLMLADQMISRIEYVHTKNFLHRDIKPDNFLMGTGRHCNKLFLIDFGL
AKKYRDNRTRQHIPYREDKHLIGTVRYASINAHLGIEQSRRDDMESLGYVFMYFNRTS
LPWQGLKAMTKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMY
LRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTQTGKQTEKNKNNV
KDN"
BASE COUNT 722 a 530 c 542 g 629 t
ORIGIN
1 ggtttgtggt tggctgaggt ggaggaataa aatggcggcg ccggcggcgt gaccgggccc
61 tctggcccac agccattggt agcggtggca gcagtactgc tgccccaact cgctgtgccc
121 cctttctcag cccacgacat cgccacgaca gcgaggcagc gaccgccacc gagaaagagg
181 tggtggccca gcctggaacc ttgagaaacc ctcgcaaact gtggcctggc ggaaatcctg
241 gtgtgctgca gggatcaggc tgactccagg ccctgtaaca ccgggaaacg cctcggtggc
301 catttccagc agccctcatc ctcagccttg cgggccggtg ggccccggag gcctccatcc
361 tcccctagag gggtcagggc tgagcccagc ctccatcttt gcctctcagg atgacaaaca
421 acagcggctc caaagccgaa ctcgttgtgg gagggaaata caaactggtg cggaagatcg
481 ggtctggctc ctttggagac gtttatctgg gcatcaccac caccaacggc gaggaagtag
541 cagtgaagct ggaatctcag aaggtcaagc acccccagtt gctgtatgag agcaaactct
601 acacgattct tcaaggtggg gttggcatcc cccacatgca ctggtatggt caggaaaaag
661 acaacaatgt gctagtcatg gaccttctgg gacccagcct cgaagacctc tttaatttct
721 gttcaagaag gttcaccatg aaaactgtac ttatgttagc cgaccagatg atcagcagaa
781 ttgaatacgt gcatacaaag aattttctac accgagacat taaaccagat aacttcctga
841 tgggtactgg gcgtcactgt aataagttgt tccttattga ttttggtttg gccaaaaagt
901 acagagacaa caggaccagg caacacatac cgtacagaga agataaacac ctcattggca
961 ctgtccgata tgccagcatc aatgcacatc ttggtattga gcagagccgc cgagatgaca
1021 tggaatcctt aggctacgtt ttcatgtatt ttaatagaac cagcctgccg tggcaaggac
1081 taaaggctat gacaaaaaaa caaaaatatg aaaagattag tgagaagaag atgtccaccc
1141 ctgttgaagt tttatgtaag gggtttcctg cagaattcgc catgtacttg aactactgtc
1201 gtgggctgcg ctttgaggaa gtcccagatt acatgtatct gaggcagcta ttccgcattc
1261 ttttcaggac cctgaaccac caatatgact acacatttga ttggacgatg ttaaagcaga
1321 aagcagcaca gcaggcagcc tcttccagtg ggcagggtca gcaggcccaa acccagacag
1381 gcaagcaaac tgaaaaaaac aagaataatg tgaaagataa ctaagcgtga atgaggaaca
1441 gaagaagcag agcagatgat tcgagcagca tttgtttctc cccacatcta gaaattgtag
1501 ttcatatgta caccagctag tggctgtgaa caaccattta gttggtgtaa aaaactttat
1561 ttcaatataa actgactctg gggagcgttg gtgatgctgt atcccaaagt gtagcctctg
1621 taattgtgaa tattaactga ggtagtgaaa cgtgatgtct ggttttctat tgcatttatt
1681 caagtagaaa agttaactaa atggttgaca cacacgaatt ggtggagaca ttgtccatat
1741 gccaattttt tgttaaaacc ttttattttg aactagactg ctttgagata tcatttcaga
1801 aggacagtct tcagccacag ctgcaaaggt tgtaaatgct tatgattgag catttttagg
1861 gtttctccat ccctggggtt tgcaaattgt tcacataaag agcattctta aaatggttgg
1921 cttcttgtct gtaagccagc tgatctagta gtaaccaaaa attccagttt tgagaatagg
1981 aaagattccg cctgcttacc tgtgaagaca taagaaaatc ttagtaacta ccagattatc
2041 tttagaattc cacattaact atatcatgtt ctcggtattt taaaaacaac aacaaccata
2101 tttgtcacag aaatttagtt aacatcttac aactgaacat gtatgtacat ggcttagata
2161 aatgtaatca ccgtaaacac ctatatgatc tgggattttg ttcatatttt gaaatgggag
2221 cttttatgtt ttacaagttc actaaaatct gaaaactgtt tctataagga aataatactt
2281 ttttaaacaa caaccaaaaa atgccttgct gattcactag gaaataaaaa tctccccaat
2341 tttttgatag tcaacttcga gccatttgtt acatgatatt cccttgcaag taaattttat
2401 ttcattacaa aaaaaaaaaa aaa
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