LOCUS BC028710 3008 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 46, member D, mRNA
(cDNA clone MGC:26999 IMAGE:4827590), complete cds.
ACCESSION BC028710
VERSION BC028710.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3008)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3008)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028710.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303945.
FEATURES Location/Qualifiers
source 1..3008
/db_xref="H-InvDB:HIT000040617"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26999 IMAGE:4827590"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3008
/gene="FAM46D"
/gene_synonym="MGC26999"
/db_xref="GeneID:169966"
/db_xref="HGNC:HGNC:28399"
CDS 228..1397
/gene="FAM46D"
/gene_synonym="MGC26999"
/codon_start=1
/product="family with sequence similarity 46, member D"
/protein_id="AAH28710.1"
/db_xref="GeneID:169966"
/db_xref="HGNC:HGNC:28399"
/translation="MSEIRFTNLAWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDII
HVVKDQLIGQGIIVKDARLNGSVASYILASHNGISYKDLDVIFGVELPGNEEFQVVKD
AVLDCLLDFLPKDVKKEKLSPDIMKDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELK
FVSSLRRQFEFSVDSFQIVLDPMLDFYSDKNAKLTKESYPVVVAESMYGDFQEAMTHL
QHKLICTRKPEEIRGGGLLKYCSLLVHGFKPACMSEIKNLERYMCSRFFIDFPHIEEQ
QKKIESYLHNHFIGEGMTKYDYLMTLHGVVNESTVCLMSYERRQILHLITMMALKVLG
ELNILPNTQKVTCFYQPAPYFAAEARYPIYVIPEPPPVSFQPYHPLHLRGSNGMS"
BASE COUNT 1019 a 531 c 497 g 961 t
ORIGIN
1 atcaggtgat gcagaactct ggtaaaggat gttagtcttc agagtaagac tgttaaattc
61 agcaaagtct actatcagaa gacacgtttt tctggttggt gtattacttt attcagtgat
121 aatatgaaaa ttactatctt cactgaagga tctactgaat aatcatttta actcaactat
181 attgcattct tgaaagcaat cctttcaatt gatctactga cttcacaatg tctgaaatca
241 gattcaccaa tctcgcttgg gatcaagtta taacactgga tcaagtgtta gatgaagtaa
301 ttccaattca tggaaagggg aatttcccca caatggaggt aaaaccaaaa gacatcattc
361 atgttgtgaa agatcaactc atagggcaag gaattattgt taaagatgcc agattgaatg
421 gttccgtagc aagttacata cttgcaagcc acaatggaat cagctataag gatctggacg
481 ttatttttgg tgttgagctt ccaggtaacg aagaatttca ggttgttaaa gatgcagttc
541 tagactgtct acttgacttt ttaccaaaag atgtaaagaa ggaaaagctc tccccagata
601 tcatgaaaga cgcttacgta cagaaattgg tcaaggtttg caatgggcat gattgttgga
661 gtcttatctc cctttcaaat aacactggga agaatttaga actaaaattt gtgagttcac
721 tcagacggca gtttgaattt agtgtagatt cctttcaaat tgttttggat cccatgttag
781 acttctacag tgacaaaaat gccaagctaa ccaaagaatc ctatcctgtt gtggtagctg
841 aaagcatgta tggagacttc caggaagcaa tgacacattt gcaacacaag ctcatatgta
901 ccaggaaacc tgaagagatt agaggtggtg gccttctgaa gtactgcagc ttgctggttc
961 atggcttcaa gccagcctgt atgtcagaaa tcaaaaacct agaacgttat atgtgctcta
1021 gattctttat tgattttcct catatagaag aacagcaaaa gaaaattgaa tcatacctcc
1081 acaaccattt cataggtgaa ggaatgacca agtatgacta ccttatgacc ttgcatggag
1141 ttgtgaatga aagcactgtt tgcctcatga gttatgaaag aagacagatt ctccacctga
1201 tcaccatgat ggctttgaaa gtacttggag aactaaatat tctacccaat acacaaaagg
1261 taacttgctt ttatcagcct gctccgtact ttgcagctga ggcaaggtac cctatttatg
1321 taatacctga gccacccccc gttagcttcc agccatacca cccactgcac cttcgtggat
1381 caaatggtat gagttaaaaa atacacatgc aaccatagaa actttgattt aattaaacac
1441 catttaaaag caagtttcca aatgtaaaat tcaagatctg tttttatttt tgtacagtta
1501 ccaattattt tcaattacag ttgatggaat agtagttacc aactattttt gatcaattaa
1561 gccatcatag taaatacaat atctataaac caaccacttt aaatgttttt caaacgttat
1621 tgactagcta taataacttt caaatgttgt gttccccttg aagtgatttt caaatctttt
1681 gactacttgt gactttcaaa tttgctgtga catatattag agatgcctgc atctttgact
1741 ataacataaa aggacagatt catgttttaa aattaagatg tacagtgaag tatcaaattt
1801 tttatattca gtcagttcct ttgttacatt tagttctttt tttctattga acaataccat
1861 caataaatgt tcagtactta acagaaatgc ctaatttcaa aagcaacaga ttcagaagac
1921 attaaaaccc tggacttttc aagcattttt ttttgacaat taaattgggt tggatacaaa
1981 aatcctacta tagtttaaag gaatactgga aaaaaatggt tctggaaagc cctggacatt
2041 agtaatttgt catctatata ataaaacatt tagttaattt gtggatttga ataacaatac
2101 catacagctg tgcaactact actgagatca gatacagggt tttttgcccc tcaaaataag
2161 ttaaaacgaa tgaaaatgac cagctctgaa tgtgaaagct ttctatcatc atctactaca
2221 aagagactct aaatggcaaa caggaaaaaa acaggcagag gtttatagcc atagcattta
2281 ccattttatg gcttatttga aaaacatctt tatgttgaga aacattccat ttcagtaagt
2341 taaaatattt tcattgtaac taaatgaagc aggtttttca ttttgccttt accaaagatc
2401 attttctaac atgccactca agtgcctctt cgtgtgaatt tttgcgtaac actataattt
2461 attcaacaac tgtatacctt tacagtatat ctaaatatat acttactaca tcgagtatac
2521 tgctagaaaa atctaccagt gggattaaaa atgtattttc ttcccataat gaaaataatt
2581 catgaccaat attacctgaa gtgtcagaag aggagctgtc ttaaattaat atggatcagg
2641 ccattggaaa acttcagtat ttccacttgg ttatgatttt ttgtgagttt ccatttcagt
2701 ttttattgac catcacgttt tctatcacaa catgacctga cagttgtatc ccgataattt
2761 gccagttata gactgtgctt atcttcactg tattacaata ttggacagaa gtacaccaaa
2821 tacggcattt tcaaataacc aatatttctg agatgtttta taccacagca caagtggcca
2881 tcagtatatt tttaaagaat tatatatcac agaaccctga ggctttaaaa cactatggac
2941 ttaccacttt cttgacaaag aatttgtaat tacaataaaa tatttagaaa tgaaaaaaaa
3001 aaaaaaaa
//