LOCUS BC028708 4098 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 26, mRNA (cDNA clone
MGC:26982 IMAGE:4825941), complete cds.
ACCESSION BC028708
VERSION BC028708.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4098)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4098)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028708.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222103.
FEATURES Location/Qualifiers
source 1..4098
/db_xref="H-InvDB:HIT000040616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26982 IMAGE:4825941"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4098
/gene="C20orf26"
/gene_synonym="dJ1178H5.4"
/gene_synonym="DKFZP434K156"
/db_xref="GeneID:26074"
/db_xref="HGNC:HGNC:15872"
CDS 77..3790
/gene="C20orf26"
/gene_synonym="dJ1178H5.4"
/gene_synonym="DKFZP434K156"
/codon_start=1
/product="chromosome 20 open reading frame 26"
/protein_id="AAH28708.2"
/db_xref="GeneID:26074"
/db_xref="HGNC:HGNC:15872"
/translation="MSVLTSPRGKVEVVHCRRTESQDVYCIKSLIRKFTCKLFGKLNI
IYLLEKANLAVTLCNDKEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPCTPLNT
LFMHLFVAVDEYSVGCCKEILRTVYKAVPELHFIFLIVPSYMSLGSTLITVFDQVGNI
PCLTYEEDFAVHICHRHSHYPQLHVRKARVEDHDDLMPIFMRYDTILKETYGEYFLAE
LIEAQDEENHAVVCEVEGTAVGFMSVCSRVNMQLLHECFDLGPFHGLCFPHPDDVLES
PQDLSVRRSQDAELRSSSQGSQKIVEELQEPVSPDTMENIQGNIAREAASEEALTAVQ
SGNVSEPEDIEKLSDISTGYAQYHHVSSRSLASLILPEEPVHFRPIYRGASAAFCIQL
FCIDEKYEARSLDFMNFVFSLFSDKNFCVISLPHLTPEFFLIQNFVKMVPFNTCTLEQ
DLYVFHRAGLLKSINIRFATLLDTPGVENLVSTLMLNKSILEDLDRYNKARKDPDGTL
LQAFVAEVAEQIVGIAVIRNEMDIEYIRSHYNIEDFIYFSHHQREEHGHMHHFALNPI
FRHYTKFFLKEILRLGFKSCLYYRVYPKSREGKFQNPYAHSLTSALHYLVPVRPRRQI
VYPLEKLGINAPSKAVSKDPMSYALNHTNRKLTLEPKITVNAKIIVVGASSVGISFLE
TLVFCSHMKFNNLTLISTHGLPGKKLLDTEQRKFLASDHCFNDKDYALMSLCSWVNVV
VGRMTGIDRAAKHVVLSTDEIVPYDHLILCTGQQYQVPCPTEADISQHLTNREVPNSS
QRRYTGKVPCNHFTLNEEEDCFKALIWIRNNSITTEGNIIVYGNTIDTYTTVETLLNL
GVSGSRIHLVQPPPASTITCINNYSVESAVADALGAAGVTMYRDAILAQWNDGLHPDP
IYSASFTTPTKPFRLQCSMFFSFCEKNVDYETFKALNDACLVYDSRLVIDTNFHTNDI
AIRAAGSLTKFSNRYYSNEWTHSNFSSKEIGFQLAAAMLHLFDPTLEPVTEPPANLDR
LIPMYKGAKIQGGILPGSYHYLHIAKPAIPTPLEVQMAQPNYGLELVTGSAKNGTYFR
IHINKYKMVETITCLSREPFPASNYIRLFGQHEQLLNNLCARYDENLITDLYSYFTEP
WCLALFHDRFIDLRKELRQILASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYLKRVF
EESIYKTLVERSTLDYLHYNRYHLPMYAWPGIV"
BASE COUNT 1099 a 1051 c 910 g 1038 t
ORIGIN
1 ggcggcgcgt ggagtgcggc gtcctggagc tgcggatgag tggacttttt tctctctttt
61 ggggacagga taaaaaatgt cagtactcac ttctccaaga ggaaaggtag aagttgttca
121 ttgccgaaga acagaatcac aggatgttta ttgtatcaaa agccttatta gaaaatttac
181 ctgcaagctg tttgggaagc taaatatcat ctatcttcta gaaaaggcca accttgctgt
241 taccctctgc aatgacaagg aggagatcat ggcccaggcc accttcctgg actaccgcaa
301 ctggaatgtt gccaagcagg atgactgggt gtcagtgttc cgggagctcg acagtgacat
361 cccatgcaca cccctgaata cgttgttcat gcacctcttt gtggccgtgg atgagtattc
421 tgttggctgt tgcaaagaga ttcttcgaac cgtgtataag gcagtgccag agctgcactt
481 catatttctc atcgtgccat cctacatgag cctaggctca actctcataa ctgtttttga
541 ccaagtgggg aacatcccgt gtctgacgta tgaggaagac tttgcagtgc atatatgtca
601 caggcacagc cactatcctc agctgcacgt tcgcaaagcc agggtggaag accatgacga
661 tctcatgcca atatttatgc gctatgacac aattctgaag gaaacttacg gtgaatactt
721 cctggccgaa ctaatagagg cccaagatga agagaatcat gctgttgtgt gtgaggtgga
781 aggcacagct gttgggttca tgagtgtgtg ctcaagagtg aacatgcaac tgctgcatga
841 gtgctttgac ttgggccctt tccacggact ctgtttccca catcctgatg acgttctgga
901 atcaccacaa gacctaagtg tccgaagaag tcaagatgct gagctcagga gtagcagcca
961 aggttcccaa aaaatagtcg aggagttgca ggaacctgtc tctccagata ccatggaaaa
1021 catccaggga aatattgcca gagaagctgc atccgaggaa gctttaacag cagtccaaag
1081 tggaaatgtt agtgaaccgg aggacataga aaaactcagt gacatctcca ctggatatgc
1141 acagtatcac catgtcagca gtaggagctt ggcatcgctc atactgcctg aagagcccgt
1201 ccacttccgc cccatctaca ggggagcctc agctgctttt tgtattcagc tgttttgtat
1261 tgatgagaaa tatgaagcaa ggtcgctgga ttttatgaat tttgttttca gtcttttttc
1321 tgataagaac ttctgtgtaa tttctctgcc ccatctcacc cccgagttct tcctcatcca
1381 gaacttcgtg aaaatggtcc ctttcaacac ctgcaccctc gagcaggacc tctacgtctt
1441 ccaccgggct ggattgctca agtccattaa tataagattt gccactctct tggatactcc
1501 tggtgtggaa aatcttgtca gcaccctcat gttgaataaa agcatattgg aggacttaga
1561 ccgttacaac aaggctcgca aagaccctga tggaacactg ctgcaggcat ttgtagctga
1621 agttgcagaa caaatagttg gtattgcagt gatcagaaat gaaatggaca ttgagtacat
1681 acggtcccat tacaacattg aagatttcat ctacttcagt caccaccagc gcgaagaaca
1741 cgggcacatg catcactttg ccctcaaccc cattttccgg cactacacca agttctttct
1801 gaaggagatc ctgcgtttag gctttaaatc ctgtctctac taccgtgttt acccaaaatc
1861 cagagaaggc aagttccaga acccctacgc ccactccctg acatctgccc ttcattactt
1921 ggttcccgtg cgaccacgac gacagattgt ctatcctctg gaaaagcttg gcataaacgc
1981 tccatcaaag gcggtctcca aggatccgat gagttatgct ttaaaccata caaacagaaa
2041 actaacattg gaacctaaaa ttactgtcaa tgccaagatc attgtggttg gtgcatccag
2101 tgttggaatt tccttcctag agacattggt attttgctct cacatgaagt ttaataatct
2161 taccctgatt tcaactcatg gactcccagg aaaaaaactt ctggacactg aacaaaggaa
2221 atttttagcc agcgaccact gttttaatga taaagattat gcactgatgt cactgtgctc
2281 ctgggttaat gtcgtggtgg gtagaatgac cggcatagac cgagcagcca agcacgttgt
2341 gctttccacg gacgagatcg tgccctacga ccacctcatc ctctgcaccg ggcagcagta
2401 ccaggtccca tgccctacag aggctgatat tagtcaacac ctgacaaaca gggaggttcc
2461 caacagcagt cagcggcggt acacggggaa agttccttgc aaccatttca ctctcaacga
2521 ggaagaggat tgctttaagg cactgatttg gataaggaat aactccatca ccacagaagg
2581 gaatatcatt gtctatggga atacaattga tacttacacc accgtggaga cgctcttaaa
2641 ccttggcgtg agcggcagcc gcatccacct cgtgcagccc ccgcccgcct ccaccatcac
2701 ctgcatcaac aactactcgg tggagagcgc cgtggcggac gcgctaggag ccgccggagt
2761 cactatgtac cgggatgcga tcctggccca gtggaatgac ggcctgcacc cagaccccat
2821 ctacagcgcc tccttcacca cacccaccaa gcctttcaga ctccagtgct ctatgttctt
2881 cagcttctgt gagaagaatg tggattatga aacgtttaaa gccctcaatg atgcatgtct
2941 tgtgtatgac agtcgacttg tgattgatac caacttccac accaacgaca tagccatcag
3001 agctgctggc tccctcacca aattctccaa tagatactac tcaaatgagt ggactcacag
3061 caacttcagt tccaaagaaa ttggctttca gctggcagca gctatgctac atctctttga
3121 tccaaccctt gagcctgtga ccgagccacc agctaatctt gaccggctca tccccatgta
3181 caagggagcc aagattcaag ggggcattct tcctgggtct taccattatc tgcatattgc
3241 caagcctgcc attccaactc ccttggaggt acaaatggca cagcctaatt atggtttaga
3301 actagtaacc ggcagtgcga aaaatgggac ttacttccga attcatatta acaagtataa
3361 aatggtggaa accatcacgt gcctttctag ggagcccttc cccgcctcca actacatccg
3421 cttgtttggc cagcacgagc aactcctcaa caacctgtgt gctcggtacg atgaaaacct
3481 gatcacagat ctctatagct acttcaccga gccgtggtgc ctggccctgt tccacgatcg
3541 ttttattgat ctcaggaaag agttacgcca aatcttagcc tccaaggagg aggaagatct
3601 tccttccata gagcagttag cccatcaaat agaagatgag gaaatcaacc cgactgagaa
3661 gcccaggcaa tacctcaaaa gagtttttga ggaatccatc tacaaaaccc tggtggagag
3721 aagcactctt gactacctgc actataaccg ctaccacctg cccatgtacg cgtggccagg
3781 catcgtttag ttgtaggcag ggtctcccct ttatggtttt catttattta gttcctggaa
3841 acgcgctctg tagaaataga aaagttctct gcagcctggt ttgacagcga agccagcccc
3901 tggtggtttt gttcactcct ttcctttcct gacttatgcc tgtagttttc tatcatccca
3961 gtaggtggca cacggccgtg tgcctctctt ctggggcagg ctcgctttac aaatcccagg
4021 catgttcctg tgcagaataa tccatttcag caataaaatg agatcatact gtgtaaaact
4081 tgaaaaaaaa aaaaaaaa
//