LOCUS BC028685 1664 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens LanC lantibiotic synthetase component C-like 1
(bacterial), mRNA (cDNA clone MGC:26280 IMAGE:4829574), complete
cds.
ACCESSION BC028685
VERSION BC028685.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1664)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1664)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028685.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174444.
FEATURES Location/Qualifiers
source 1..1664
/db_xref="H-InvDB:HIT000040604"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26280 IMAGE:4829574"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1664
/gene="LANCL1"
/gene_synonym="p40"
/db_xref="GeneID:10314"
/db_xref="MIM:604155"
CDS 76..1275
/gene="LANCL1"
/gene_synonym="p40"
/codon_start=1
/product="LANCL1 protein"
/protein_id="AAH28685.1"
/db_xref="GeneID:10314"
/db_xref="MIM:604155"
/translation="MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELL
QQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKR
SITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIY
ALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAA
HGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWC
HGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLT
LYNLTQDMKYLYRACKFAEWCLEYGEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKA
RFPAFEL"
BASE COUNT 464 a 364 c 377 g 459 t
ORIGIN
1 gagaagggct tcaggacgcg ggaggcgcac ttgcttcaag tcgcgggcgt gggaacgggg
61 cttgcttccg gcgtcatggc tcaaagggcc ttcccgaatc cttatgctga ttataacaaa
121 tccctggccg aaggctactt tgatgctgcc gggaggctga ctcctgagtt ctcacaacgc
181 ttgaccaata agattcggga gcttcttcag caaatggaga gaggcctgaa atcagcagac
241 cctcgggatg gcaccggtta cactggctgg gcaggtattg ctgtgcttta cttacatctt
301 tatgatgtat ttggggaccc tgcctaccta cagttagcac atggctatgt aaagcaaagt
361 ctgaactgct taaccaagcg ctccatcacc ttcctttgtg gggatgcagg ccccctggca
421 gtggccgctg tgctatatca caagatgaac aatgagaagc aggcagaaga ttgcatcaca
481 cggctaattc acctaaataa gattgatcct catgctccaa atgaaatgct ctatgggcga
541 ataggctaca tctatgctct tctttttgtc aataagaact ttggagtgga aaagattcct
601 caaagccata ttcagcagat ttgtgaaaca attttaacct ctggagaaaa cctagctagg
661 aagagaaact tcacggcaaa gtctccactg atgtatgaat ggtaccagga atattatgta
721 ggggctgctc atggcctggc tggaatttat tactacctga tgcagcccag ccttcaagtg
781 agccaaggga agttacatag tttggtcaag cccagtgtag actacgtctg ccagctgaaa
841 ttcccttctg gcaattaccc tccatgtata ggtgataatc gagatctgct tgtccattgg
901 tgccatggcg cccctggggt aatctacatg ctcatccagg cctataaggt attcagagag
961 gaaaagtatc tctgtgatgc ctatcagtgt gctgatgtga tctggcaata tgggttgctg
1021 aagaagggat atgggctgtg ccacggttct gcagggaatg cctatgcctt cctgacactc
1081 tacaacctca cacaggacat gaagtacctg tatagggcct gtaagtttgc tgaatggtgc
1141 ttagagtatg gagaacatgg atgcagaaca ccagacaccc ctttctctct ctttgaagga
1201 atggctggaa caatatattt cctggctgac ctgctagtcc ccacaaaagc caggttccct
1261 gcatttgaac tctgaaagga tagcatgcca cctgcaactc actgcatgac cctttctgta
1321 tattcaaacc caagctaagt gcttccgttg ctttccaagg aaacaaagag tcaaactgtg
1381 gacttgattt tgttagcttt tttcagaatt tatctttcat tcagttccct tccattatca
1441 tttactttta cttagaagta tccaaggaag tcttttaact ttaatttcca tttcttccta
1501 aagggagagt gagtgatatg tacagtgttt tgagattgta tacatatatt ccagaacttg
1561 gaggaaatct tatttaagtt tatgaatata accatctgtt actgttctaa aaatgtttaa
1621 aagaaactca atacagataa aaaaaaaaga aaaaaaaaaa aaaa
//