LOCUS BC028679 2968 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens kinesin-associated protein 3, mRNA (cDNA clone
MGC:26126 IMAGE:4829354), complete cds.
ACCESSION BC028679
VERSION BC028679.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2968)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2968)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028679.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18105053.
FEATURES Location/Qualifiers
source 1..2968
/db_xref="H-InvDB:HIT000040603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26126 IMAGE:4829354"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2968
/gene="KIFAP3"
/gene_synonym="dJ190I16.1"
/gene_synonym="FLJ22818"
/gene_synonym="KAP3"
/gene_synonym="SMAP"
/gene_synonym="Smg-GDS"
/db_xref="GeneID:22920"
/db_xref="HGNC:HGNC:17060"
/db_xref="MIM:601836"
CDS 229..2607
/gene="KIFAP3"
/gene_synonym="dJ190I16.1"
/gene_synonym="FLJ22818"
/gene_synonym="KAP3"
/gene_synonym="SMAP"
/gene_synonym="Smg-GDS"
/codon_start=1
/product="kinesin-associated protein 3"
/protein_id="AAH28679.1"
/db_xref="GeneID:22920"
/db_xref="HGNC:HGNC:17060"
/db_xref="MIM:601836"
/translation="MQGEDARYLKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDP
MLGERKECQKIIRLKSLNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDS
LSGKEKKEKSSKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLA
RNPDNLEELLLNETALGALARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYK
IGALCMNIIDHELKRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQE
QLLRVALYLLLNLAEDTRTELKMRNKNIVHMLVKALDRDNFELLILVVSFLKKLSIFM
ENKNDMVEMDIVEKLVKMIPCEHEDLLNITLRLLLNLSFDTGLRNKMVQVGLLPKLTA
LLGNDNYKQIAMCVLYHISMDDRFKSMFAYTDCIPQLMKMLFECSDERIDLELISFCI
NLAANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTKNLFIDYVGDL
AAQISNDEEEEFVIECLGTLANLTIPDLDWELVLKEYKLVPYLKDKLKPGAAEDDLVL
EVVIMIGTVSMDDSCAALLAKSGIIPALIELLNAQQEDDEFVCQIIYVFYQMVFHQAT
RDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQ
WLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDLFYNSDGLIASEGAISPDFFN
DYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAYGFRPDEPYYYGYGS"
BASE COUNT 927 a 554 c 655 g 832 t
ORIGIN
1 aggcgactct gggcgggtct gggccgctcc agtgttttgg ggcacagaag ctgtgggagg
61 agctggaggc ttcaccgtgg taaccacagc gccgctgctg ccccgccttg caggcctcag
121 gactgtcatc gcctctgggt gtgagggtac tttggccacc gtccccggaa ataaccgcgc
181 ctgcctctca agatacccca tcctctccac gccgctgccg ctgccgccat gcaaggggag
241 gacgccagat acctcaaaag gaaagttaaa ggagggaata tagatgtaca tccatcagaa
301 aaagcactca ttgttcacta tgaagtggaa gctaccattc ttggagaaat gggggacccc
361 atgttgggag aacgaaaaga atgtcaaaaa atcattcgac ttaagagtct caatgccaac
421 acagatataa cttccctggc aaggaaggtg gttgaagaat gtaaactcat tcatccttca
481 aaactaaatg aggtagaaca gctgttgtac tatctacaga accgccgtga ttcattgtca
541 ggaaaagaga aaaaagaaaa atcaagcaag cctaaagatc cacctccttt tgaaggaatg
601 gagattgatg aagttgctaa cattaatgac atggatgaat atattgagtt attatatgaa
661 gatattcctg acaaagttcg gggttctgct ttgatcctgc agcttgctcg aaatcctgat
721 aacttggaag aactactatt gaatgaaact gcccttggtg cattagcaag ggtcctgaga
781 gaagactgga agcaaagtgt cgagttagct acaaacataa tttacatctt tttttgtttc
841 tccagctttt ctcaatttca tggacttatt actcactata aaattggagc tctgtgtatg
901 aatattattg atcatgagtt aaaaagacat gagctttggc aagaagaact ctcaaagaag
961 aagaaagctg ttgatgaaga ccctgaaaac caaaccttga gaaaggatta tgaaaaaacc
1021 tttaaaaagt accaggggct tgtggtaaaa caggaacagc tattacgagt tgctctttat
1081 ttgcttctga atcttgctga ggatactcgt accgaactga aaatgaggaa caagaacata
1141 gttcacatgt tggtgaaagc ccttgatcgg gacaattttg agctgctaat tttagttgtg
1201 tcattcttga agaaactcag catttttatg gagaataaaa atgatatggt ggaaatggat
1261 attgttgaaa aactggtgaa aatgatacct tgcgagcatg aagacctgct gaatatcacc
1321 ctccgacttt tactaaacct atcctttgac acaggactga ggaataagat ggtacaagtt
1381 ggactgcttc ccaagctcac tgcactccta ggcaatgaca actacaaaca aatagcaatg
1441 tgtgttcttt accacataag catggatgac cgctttaaat caatgtttgc atacactgac
1501 tgtataccac agttaatgaa gatgctgttt gaatgttcag atgaacgaat tgacttggaa
1561 ctcatttctt tctgcattaa tcttgctgct aacaaaagaa atgtacagct tatctgtgaa
1621 ggaaatgggc tgaagatgct catgaagagg gctctgaagt ttaaggatcc attgctgatg
1681 aaaatgatta gaaacatttc tcagcatgat ggaccaacta aaaatctgtt tattgattat
1741 gttggggacc ttgcagccca gatctctaat gatgaagaag aggagtttgt gattgaatgt
1801 ttgggaactc ttgcaaactt gaccattcca gacttagact gggaattggt tcttaaagaa
1861 tataagttgg ttccatacct caaggataaa ctaaaaccag gtgctgcaga agatgatctt
1921 gttttagaag tggttataat gattggaact gtatccatgg atgactcttg tgctgcattg
1981 ctagccaaat ctggcataat ccctgcactc attgaattgc taaatgctca acaagaagat
2041 gatgaatttg tgtgtcagat aatttatgtc ttctaccaga tggttttcca ccaagccaca
2101 agagacgtca taatcaagga aacacaggct ccagcatatc tcatagacct aatgcatgat
2161 aagaataatg aaatccgaaa ggtctgtgat aatacattag atattatagc ggaatatgat
2221 gaagaatggg ctaagaaaat tcagagtgaa aagtttcgct ggcataactc tcagtggctg
2281 gagatggtag agagtcgtca gatggatgag agtgagcagt acttgtatgg tgatgatcga
2341 attgagccat acattcatga aggagatatt ctcgaaagac ctgacctttt ctacaactca
2401 gatggattaa ttgcctctga aggagccata agtcccgatt tcttcaatga ttaccacctt
2461 caaaatggag atgttgttgg gcagcattca tttcctggca gccttggaat ggatggcttt
2521 ggccaaccag ttggcattct tggacgccct gccacagcat atggattccg ccctgatgaa
2581 ccttactact atggctatgg atcttgataa agtatctgtt tccatgtgta atctcagctt
2641 agaagaaatc tgtgtgggtt gggttaattt tggatctttg cctaataatg catgttgatg
2701 ttattgtggg tctgtgtttg tttttatttt tatatgttgt tagctgcaga ttaaccccag
2761 cccctctgtc ttctgttaag tacagttgat actgacattg ttcactcatc aaaccacatc
2821 ttgatgctaa gtaacatttc ccatgagcct caaaactgaa tgctgaaaag ctactagact
2881 ggaaaacaaa cactgcatta tgtatgttaa gtgactaatt taatttcaat taaaaagcgt
2941 aaagtgaaaa tgaaaaaaaa aaaaaaaa
//