LOCUS BC028609 2802 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens coiled-coil domain containing 93, mRNA (cDNA clone
MGC:33252 IMAGE:4826022), complete cds.
ACCESSION BC028609
VERSION BC028609.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361622.
FEATURES Location/Qualifiers
source 1..2802
/db_xref="H-InvDB:HIT000040591"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33252 IMAGE:4826022"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2802
/gene="CCDC93"
/gene_synonym="FLJ10996"
/gene_synonym="MGC13033"
/db_xref="GeneID:54520"
/db_xref="HGNC:HGNC:25611"
CDS 142..2037
/gene="CCDC93"
/gene_synonym="FLJ10996"
/gene_synonym="MGC13033"
/codon_start=1
/product="coiled-coil domain containing 93"
/protein_id="AAH28609.2"
/db_xref="GeneID:54520"
/db_xref="HGNC:HGNC:25611"
/translation="MGLPRGPEGQGLPEVETREDEEQNVKLTEILELLVAAGHFRARI
KGLSPFDKVVGGMTWCITTCNFDVDVDLLFQENSTIGQKIALSEKIVSVLPRMKCPHQ
LEPHQIQGMDFIHIFPVVQWLVKRAIETKEEMGDYIRSYSVSQFQKTYSLPEDDDFIK
RKEKAIKTVVDLSEVYKPRRKYKRHQGAEELLDEESRIHATLLEYGRRYGFSCQSKME
KAEDKKTALPAGLSATEKADAHEEDELRAAEEQRIQSLMTKMTAMANEESRLTASSVG
QIVGLCSAEIKQIVSEYAEKQSELSAEESPEKLGTSQLHRRKVISLNKQIAQKTKHLE
ELRASHTSLQARYNEAKKTLTELKTYSEKLDKEQAALEKIESKADPSILQNLRALVAM
NENLKSQEQEFKAHCREEMTRLQQEIENLKAERAPRGDEKTLSSGEPPGTLTSAMTHD
EDLDRRYNMEKEKLYKIRLLQARRNREIAILHRKIDEVPSRAELIQYQKRFIELYRQI
SAVHKETKQFFTLYNTLDDKKVYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQI
VEGIKQSRMKMEKKKQENKMRRDQLNDQYLELLEKQRLYFKTVKEFKEEGRKNEMLLS
KVKAKAS"
BASE COUNT 880 a 602 c 691 g 629 t
ORIGIN
1 agcggaggcg gcggcggcgg cggcggcggc agagggagtt tccgctttgc actccacccc
61 ggtagcagct ccgcggcagg gacagcttcc tccggacgct tggcgggctt cgctctcgcc
121 ttacgacagc ccggtcggat catgggtttg cccagggggc cggagggcca gggtctcccg
181 gaggtggaaa caagagaaga tgaagaacaa aatgtcaagt tgactgaaat tctggagctc
241 ttggttgcag ctgggcattt cagggcaaga attaaaggct tatcaccctt tgacaaggta
301 gtaggaggaa tgacttggtg tatcaccact tgcaactttg atgtagatgt tgatttgctc
361 tttcaagaaa actctacgat aggtcaaaaa atagctctgt cagaaaaaat tgtctcggtc
421 ctgccaagga tgaaatgccc acaccagctg gagccccacc agatccaggg gatggatttt
481 attcacatat ttcctgttgt tcagtggctg gtgaaacgag ctatagaaac aaaagaagag
541 atgggtgact atatccgctc ctactctgta tcccagttcc agaagactta cagtctccct
601 gaggatgatg acttcataaa gagaaaagaa aaggccatca agacagttgt ggacctctca
661 gaagtgtaca agccccgtcg gaaatacaaa cgccaccagg gagcagagga gctacttgat
721 gaagaatctc gaatccatgc tacacttttg gaatatggca ggagatatgg atttagctgc
781 cagagcaaaa tggagaaggc tgaggacaag aaaacggcac ttccagcagg gctgtcagct
841 acagaaaaag ctgatgccca cgaggaagat gagcttcgag cagctgaaga gcagcgtatt
901 cagtcgctga tgaccaagat gaccgctatg gcaaatgagg agagccgtct caccgcaagc
961 tccgtgggcc agattgtggg actctgctct gctgagatca agcagattgt gtccgagtat
1021 gcagagaagc agtctgagct atcagctgaa gaaagtccag aaaaattagg aacctcccag
1081 ctacatcgcc ggaaagtcat ttccttgaac aaacagattg cgcaaaagac caaacatctt
1141 gaagagctgc gagcaagtca caccagccta caagccagat ataatgaagc caagaaaacg
1201 ctgacagagc tgaagactta cagtgagaaa ctggacaaag agcaagcagc cctcgagaag
1261 atagaatcca aagctgatcc aagtatccta cagaacctga gagcacttgt agccatgaat
1321 gaaaatctga aaagtcaaga acaggaattt aaagcacatt gtcgagagga gatgacacga
1381 ctacagcaag aaattgaaaa cctgaaagct gagagagcac cacgtggaga tgaaaagacc
1441 ctctccagtg gagagccgcc tggtaccttg acctctgcaa tgactcatga cgaagaccta
1501 gacagacggt ataatatgga gaaagagaaa ctttacaaga tacgtttact acaggctcga
1561 agaaatcgag aaatagcaat tttgcaccgc aagattgatg aagtccctag ccgtgccgag
1621 ctaatacagt atcagaagag atttattgaa ctctaccgcc agatttcagc agtgcacaaa
1681 gaaaccaagc agttcttcac tttatataat accctggatg ataaaaaggt ttatttggaa
1741 aaagagatta gtctgctgaa ctcaattcat gagaacttct cacaggccat ggcctcccct
1801 gctgcccggg accagttttt acgtcagatg gaacagattg tggaaggaat taagcaaagt
1861 agaatgaaga tggaaaagaa aaagcaagag aacaaaatga gaagagacca gttgaacgac
1921 cagtacttgg agctgttaga aaagcagagg ctatacttta agactgtgaa agagttcaag
1981 gaggagggcc gcaagaacga gatgctgctg tccaaggtga aagcgaaggc ctcctgaaca
2041 tccccagccg tggctgtatg tcattgattt tacttttaag caccgtatat cacctacaag
2101 atcatgaaat ggttctgaaa gcgacagtag agagatgcag ttgtgatgat ttcaacaacc
2161 tggatgtttt ctttctcctc tttgcttcca ttcatctctg ttggctgctg ttgatggagt
2221 cagacagtaa acacgtggct tggataacac ccatcatcct atgaagaata tagggagtac
2281 ttgttctctg ttgattcaac ttttatgtct ccagtaacat tgcgcttatg aaggtacctg
2341 tatttgtatg gactctgaat aaagaagaat tcatttgttt agcaagtatt agttcagcaa
2401 ccactgagaa ataagcactg aggaagattc agagacgtgt aaaacacagt tcctactgca
2461 caagtaccca gcaggtggcc cagggaggca gatacagcac acttgaccgc agaactgggc
2521 tatccaagat gtttttcagt aaacagaagg catttagctg aaatgatcag cccatgtagt
2581 gttggtcact tgggcctttc acctgccatg gtaccttttg ttcccagctc ctccaggtgc
2641 cagccagcag gcttggtggt gacagcaact ggaacgaaag ttcagtgttg ttttaatttt
2701 tatacgttac tcaagttgat ttctcagaaa attgaaaaca gaccttgtgc tgaggacacg
2761 tcaataaaaa ttataccttc ccctacaaaa aaaaaaaaaa aa
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