LOCUS BC028607 3135 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens serine incorporator 1, mRNA (cDNA clone MGC:33244 IMAGE:4794962), complete cds. ACCESSION BC028607 VERSION BC028607.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3135) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3135) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: a Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222115. FEATURES Location/Qualifiers source 1..3135 /db_xref="H-InvDB:HIT000040590" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33244 IMAGE:4794962" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3135 /gene="SERINC1" /gene_synonym="KIAA1253" /gene_synonym="TDE1L" /gene_synonym="TMS-2" /db_xref="GeneID:57515" /db_xref="HGNC:HGNC:13464" CDS 68..1429 /gene="SERINC1" /gene_synonym="KIAA1253" /gene_synonym="TDE1L" /gene_synonym="TMS-2" /codon_start=1 /product="serine incorporator 1" /protein_id="AAH28607.1" /db_xref="GeneID:57515" /db_xref="HGNC:HGNC:13464" /translation="MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYAL FLLVGVCVACVMLIPGMEEQLNKIPGFCENEKGVVPCNILVGYKSVYRLCFGLAMFYL LLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGA FCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFV YYTHPASCSENKAFISVNMLLCVGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTW SAMTNEPETNCNPSLLSIIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIR TSNNSQVNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFM LFLASLYIMMTLTNWYRYEPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNR DFD" BASE COUNT 918 a 517 c 685 g 1015 t ORIGIN 1 agcggaaggg cgagaaagaa gctgtctcca tcttgtctgt atccgctgct cttgtgacgt 61 tgtggagatg gggagcgtcc tggggctgtg ctccatggcg agctggatac catgtttgtg 121 tggaagtgcc ccgtgtttgc tatgccgatg ctgtcctagt ggaaacaact ccactgtaac 181 tagattgatc tatgcacttt tcttgcttgt tggagtatgt gtagcttgtg taatgttgat 241 accaggaatg gaagaacaac tgaataagat tcctggattt tgtgagaatg agaaaggtgt 301 tgtcccttgt aacattttgg ttggctataa atctgtatat cgtttgtgct ttggtttggc 361 tatgttctat cttcttctct ctttactaat gatcaaagtg aagagtagca gtgatcctag 421 agctgcagtg cacaatggat tttggttctt taaatttgct gcagcaattg caattattat 481 tggggcattc ttcattccag aaggaacttt tacaactgtg tggttttatg taggcatggc 541 aggtgccttt tgtttcatcc tcatacaact agtcttactt attgattttg cacattcatg 601 gaatgaatcg tgggttgaaa aaatggaaga agggaactcg agatgttggt atgcagcctt 661 gttatcagct acagctctga attatctgct gtctttagtt gctatcgtcc tgttctttgt 721 ctactacact catccagcca gttgttcaga aaacaaggcg ttcatcagtg tcaacatgct 781 cctctgcgtt ggtgcttctg taatgtctat actgccaaaa atccaagaat cacaaccaag 841 atctggtttg ttacagtctt cagtaattac agtctacaca atgtatttga catggtcagc 901 tatgaccaat gaaccagaaa caaattgcaa cccaagtcta ctaagcataa ttggctacaa 961 tacaacaagc actgtcccaa aggaagggca gtcagtccag tggtggcatg ctcaaggaat 1021 tataggacta attctctttt tgttgtgtgt attttattcc agcatccgta cttcaaacaa 1081 tagtcaggtt aataaactga ctctaacaag tgatgaatct acattaatag aagatggtgg 1141 agctagaagt gatggatcac tggaggatgg ggacgatgtt caccgagctg tagataatga 1201 aagggatggt gtcacttaca gttattcctt ctttcacttc atgcttttcc tggcttcact 1261 ttatatcatg atgaccctta ccaactggta caggtatgaa ccctctcgtg agatgaaaag 1321 tcagtggaca gctgtctggg tgaaaatctc ttccagttgg attggcatcg tgctgtatgt 1381 ttggacactc gtggcaccac ttgttcttac aaatcgtgat tttgactgag tgagacttct 1441 agcatgaaag tcccactttg attattgctt atttgaaaac agtattccca acttttgtaa 1501 agttgtgtat gtttttgctt cccatgtaac ttctccagtg ttctggcatg aattagattt 1561 tactgcttgt cattttgtta ttttcttacc aagtgcattg atatgtgaag tagaatgaat 1621 tgcagaggaa agttttatga atatggtgat gagttagtaa aagtggccac tattgggctt 1681 attctctgct ctatagttgt gaaatgaaga gtgaaaacaa atttgtttga ctattttaaa 1741 attatattag accttaagct gttttagcaa gcattaaagc aaatgtatgg ctgccttttg 1801 aaatatttga tgtgttgcct ggcaggatac tgcaaagaac atggtttatt ttaaaattta 1861 taaacaagtc acttaaatgc cagttgtctg aaaaatctta taaggtttta cccttgatac 1921 ggaatttaca caggtaggga gtgtttagtg gacaatagtg taggttatgg atggaggtgt 1981 cggtactaaa ttgaataacg agtaaataat cttacttggg tagagatggc ctttgccaac 2041 aaagtgaact gttttggttg ttttaaactc atgaagtatg ggttcagtgg aaatgtttgg 2101 aactctgaag gatttagaca aggttttgaa aaggataatc atgggttaga aggaagtgtt 2161 tgaaagtcac tttgaaagtt agttttgggc cagcacggta gctcaccctt gtaatcccag 2221 cactttggga ggctgaggtg ggtagattac ttgagcccag gaattcaaga ccagcctggg 2281 caacatggtg aaaccctgtt tctataaaaa ataatctggg ctttgtagca tatgcctgtg 2341 gtcccagcta ctgaggaggc tgaggtggga ggattgcttg agcccaggag gcagaggttg 2401 cagtgagcca aggtcacgtc actgcactct agcctgggca acagagtaag acaaaaaaat 2461 atatatatat tgaaaatcaa aggaggcaaa attttgacag ggaaggaagt aactgcaaaa 2521 cactaggctt tagtaggtac ttatataaaa tctagtccag ttctctcatt taaaaaaatg 2581 aagacactga agtacagact taaatagctc agatagctaa ttaggaaatt tcaagttggc 2641 caataatagc attctctctg acatttaaaa ataatttcta ttcaaaatac atgcataatt 2701 gattttacac ctcattactg gtggataatt tatgtgatgt ggattgctgg tgtccagcat 2761 gacccataaa caggtcagaa gaatgatgga atgttttaga ataaactcct gcttatagta 2821 tactacacag ttcaaaagat gtttaaaatg cttttgtatt tactgccatg taattgaaat 2881 atatagatta ttgtaacctt tcaacctgaa aatcaagcag tatgagagtt tagttatttg 2941 tatgtgtcac tagtgtctaa tgaagctttt aaaatctaca atttcttctt taaaaatatt 3001 tattaatgtg aatggaatat aacaattcag cttaattccc caaccttatt ctgtgtgtag 3061 acattgtatt ccacaatttt ggatggctgt gttttacctc taaataaatg aattcagaga 3121 aaaaaaaaaa aaaaa //