LOCUS BC028604 3380 bp mRNA linear HUM 13-SEP-2006 DEFINITION Homo sapiens superkiller viralicidic activity 2-like 2 (S. cerevisiae), mRNA (cDNA clone MGC:33192 IMAGE:4820164), complete cds. ACCESSION BC028604 VERSION BC028604.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3380) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3380) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC028604.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: g Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39930352. FEATURES Location/Qualifiers source 1..3380 /db_xref="H-InvDB:HIT000040588" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33192 IMAGE:4820164" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3380 /gene="SKIV2L2" /gene_synonym="Dob1" /gene_synonym="Mtr4" /db_xref="GeneID:23517" /db_xref="HGNC:HGNC:18734" CDS 25..3153 /gene="SKIV2L2" /gene_synonym="Dob1" /gene_synonym="Mtr4" /codon_start=1 /product="superkiller viralicidic activity 2-like 2 (S. cerevisiae)" /protein_id="AAH28604.3" /db_xref="GeneID:23517" /db_xref="HGNC:HGNC:18734" /translation="MADAFGDELFSVFEGDSTTAAGTKKDKEKDKGKWKGPPGSADKA GKRFDGKLQSESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKVQ SVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVS AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDN VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDE NGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGTKGPSNVFKIVKMIMERNFQPVIIF SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKR GIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKD FRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLT YNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVV IYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSN VKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAIS SVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVE AFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKR VLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDISAEQATALLSCFVF QENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYT WATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKI KRDIVFAASLYL" BASE COUNT 1127 a 562 c 752 g 939 t ORIGIN 1 gatgtgctct cactgctccc aaaaatggcg gacgcattcg gagatgagct gttcagcgtg 61 ttcgagggcg actcgaccac tgcggcggga accaaaaaag acaaggaaaa ggacaagggg 121 aaatggaagg ggcctccagg gtctgcagac aaggcaggga aacgttttga tggtaaatta 181 caatcagaat caactaataa tggaaaaaat aagagagatg tagatttcga aggtacagat 241 gaacccattt ttggaaagaa gcccaggata gaagagtcaa taactgaaga cttaagtttg 301 gcagacctga tgcccagagt caaggtacaa tcagttgaaa ctgttgaagg gtgtacacat 361 gaggttgcac ttcctgcaga agaggattat ttaccactta aaccacgagt tggaaaagct 421 gctaaggaat acccgttcat tcttgatgct tttcaaagag aggccattca gtgtgttgac 481 aataatcagt ctgttctagt atctgcacat acctcagcgg gaaaaacagt atgcgccgag 541 tatgccattg cattggcctt aagggaaaag cagcgtgtaa tatttaccag cccaattaag 601 gctctgagta accaaaaata ccgtgaaatg tatgaagaat ttcaagatgt tggtttgatg 661 actggtgatg ttactattaa tcctacggca tcttgtcttg ttatgaccac agagattttg 721 agaagtatgc tttacagagg ttccgaagtt atgagagaag ttgcttgggt tatatttgat 781 gaaattcatt atatgagaga ttcagaacgt ggtgtagtat gggaagaaac tattattttg 841 cttcctgata acgtccacta tgtctttctt tcggctacta ttccaaatgc ccgacagttt 901 gctgaatgga tttgccattt acataaacag ccttgtcatg ttatttacac agattatcgg 961 cccactccat tgcaacacta catttttcca gcagggggag atggcctgca tcttgtggtt 1021 gatgaaaatg gtgacttcag agaagataat tttaatactg caatgcaagt gcttcgagat 1081 gcaggtgatt tggccaaagg agaccagaaa gggcggaaag gaggaacaaa aggaccatca 1141 aatgttttca aaattgtgaa gatgattatg gaaagaaatt tccaacctgt gattattttc 1201 agttttagta agaaagattg tgaagcctat gcacttcaaa tgaccaaatt agatttcaac 1261 acagatgaag aaaagaagat ggttgaagaa gtattcagta atgcaattga ttgcttatcc 1321 gatgaagata aaaaactccc tcaggtagaa catgtacttc ctcttttgaa gaggggaatt 1381 ggtattcacc atggtggttt acttcctatt ttgaaagaaa ctatagaaat tctcttttct 1441 gaaggattga taaaggcctt atttgccacg gagacctttg ctatgggaat taacatgcca 1501 gctagaactg ttttatttac aaatgcccgc aaatttgatg ggaaggattt ccgatggatt 1561 tcttctggtg aatacattca gatgtctggt cgtgctggaa ggagaggaat ggatgataga 1621 ggaattgtaa ttcttatggt agatgaaaag atgagcccaa caattggaaa acaattactt 1681 aagggctccg ctgatcctct aaatagtgct ttccatttga cctacaacat ggttttgaac 1741 ttactacgtg tagaagaaat taatcctgag tacatgttgg aaaaatcctt ctaccagttt 1801 cagcattata gagcaattcc aggagtagta gagaaggtaa agaattcaga agaacagtat 1861 aataaaatag taattcccaa tgaagaaagt gtggttatct attataagat tagacagcag 1921 cttgccaaat tgggtaaaga aattgaagaa tatattcaca aaccaaaata ctgcttacct 1981 tttctacaac caggtcgttt ggtaaaggta aagaatgaag gagatgactt tggctgggga 2041 gtagtggtga atttctcaaa aaagtcaaat gttaagccta actctggtga actggatcct 2101 ttgtatgtag tagaagtact tctgcgctgt agcaaagaga gcttgaaaaa ttcagctaca 2161 gaagctgcaa aaccagctaa acctgatgag aaaggagaga tgcaggttgt cccagttttg 2221 gtgcatctcc tgtctgctat cagcagtgtt aggctttaca ttcctaaaga ccttcggccg 2281 gtggacaata gacagagtgt tttaaaatca atacaggaag ttcagaaacg ttttcctgac 2341 ggcatcccct tattagaccc tattgatgat atgggcattc aagatcaagg gctgaaaaaa 2401 gtcattcaga aagtagaagc ttttgagcat cgaatgtatt ctcatccact tcacaatgat 2461 ccaaatttgg aaactgtgta tacgctttgt gaaaaaaaag cacagattgc aatagatatt 2521 aaatctgcaa agcgagaact gaagaaagca agaacagtcc tacaaatgga tgaactcaaa 2581 tgtcgcaaac gtgttttaag aaggttggga tttgctactt cttctgatgt aatagagatg 2641 aaaggacgag tggcttgtga gataagcagt gctgatgagc tccttctaac tgagatgatg 2701 tttaatggcc ttttcaatga catttctgca gaacaggcaa cagcattatt aagctgcttt 2761 gtgtttcaag agaattctag tgagatgccc aaattaacag aacaattagc aggaccactt 2821 cgtcaaatgc aggaatgtgc taaaagaatt gcaaaagttt cagcagaagc caaattggaa 2881 attgatgagg aaacttatct aagctcattt aaacctcact taatggatgt agtatataca 2941 tgggcaactg gagctacatt tgcccatatc tgcaaaatga cagatgtctt tgaaggcagc 3001 ataattcgtt gtatgaggcg cctggaagaa ttgcttcgac aaatgtgtca agcagcaaaa 3061 gccattggaa acactgagct ggaaaataaa tttgcagaag gaatcaccaa aatcaagaga 3121 gatattgtgt ttgctgccag cctctacttg tagagtcagc taaaggaatg tgagatttta 3181 aattattgac cacctgtttg attacagttg actacaaatg cctgcaagtg tggatttggt 3241 tctcccatac attttaatat gtattatatt taaatcaaac atcattcata gaaagcatat 3301 tacatacatg tttatacata agcattacat ttttttaata aaaatgtata caggtggggc 3361 accgaaaaaa aaaaaaaaaa //