LOCUS BC028601 3998 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier family 4, anion exchanger, member 2
(erythrocyte membrane protein band 3-like 1), mRNA (cDNA clone
MGC:33125 IMAGE:4814066), complete cds.
ACCESSION BC028601
VERSION BC028601.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3998)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3998)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028601.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: e Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361550.
FEATURES Location/Qualifiers
source 1..3998
/db_xref="H-InvDB:HIT000040586"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33125 IMAGE:4814066"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3998
/gene="SLC4A2"
/gene_synonym="BND3L"
/gene_synonym="HKB3"
/gene_synonym="NBND3"
/db_xref="GeneID:6522"
/db_xref="MIM:109280"
CDS 335..3814
/gene="SLC4A2"
/gene_synonym="BND3L"
/gene_synonym="HKB3"
/gene_synonym="NBND3"
/codon_start=1
/product="SLC4A2 protein"
/protein_id="AAH28601.1"
/db_xref="GeneID:6522"
/db_xref="MIM:109280"
/translation="MSSAPRRPAKGADSFCTPEPGRKPRRRPGASPTGETPTIEEGEE
DEDEASEAEGARALTQPSPVSTPSSVQFFLQEDDSADRKAERTSPSSPAPLPHQEATP
RASKGAQAGTQVEEAEAEAVAVASGTAGGDDGGASGRHLPKAQPGHRSYNLQERRRIG
SMTGAEQALLPRVPTDEIEAQTLATADLDLMKSHRFEDVPGVRRHLVRKNAKGSTQSG
REGREPGPTPRARPRAPHKPHEVFVELNELLLDKNQEPQWRETARWIKFEEDVEEETE
RWGKPHVASLSFRSLLELRRTLAHGAVLLDLDQQTLPGVAHQVVEQMVISDQIKAEDR
ANVLRALLLKHSHPSDEKDFSFPRNISAGSLGSLLGHHHGQGAESDPHVTEPLMGGVP
ETRLEVERERELPPPAPPAGITRSKSKHELKLLEKIPENAEATVVLVGCVEFLSRPTM
AFVRLREAVELDAVLEVPVPVRFLFLLLGPSSANMDYHEIGRSISTLMSDKQFHEAAY
LADEREDLLTAINAFLDCSVVLPPSEVQGEELLRSVAHFQRQMLKKREEQGRLLPTGA
GLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGGLIRDVRRRYPHYLSDFRDALDP
QCLAAVIFIYFAALSPAITFGGLLGEKTQDLIGVSELIMSTALQGVVFCLLGAQPLLV
IGFSGPLLVFEEAFFSFCSSNHLEYLVGRVWIGFWLVFLALLMVALEGSFLVRFVSRF
TQEIFAFLISLIFIYETFYKLVKIFQEHPLHGCSASNSSEVDGGENMTWAGARPTLGP
GNRSLAGQSGQGKPRGQPNTALLSLVLMAGTFFIAFFLRKFKNSRFFPGRIRRVIGDF
GVPIAILIMVLVDYSIEDTYTQKLSVPSGFSVTAPEKRGWVINPLGEKSPFPVWMMVA
SLLPAILVFILIFMETQITTLIISKKERMLQKGSGFHLDLLLIVAMGGICALFGLPWL
AAATVRSVTHANALTVMSKAVAPGDKPKIQEVKEQRVTGLLVALLVGLSIVIGDLLRQ
IPLAVLFGIFLYMGVTSLNGTQFYERLHLLLMPPKHHPDVTYVKKVRTLRMHLFTALQ
LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTDREMKCLDANEAEPVFDER
EGVDEYNEMPMPV"
BASE COUNT 723 a 1264 c 1228 g 783 t
ORIGIN
1 gctttcctct ctctcagtga gtgagtggag ttgagctcct gccctccacc cagccagcct
61 gcttccctcc tgccggtccc caaggacctg ggggagggaa gcctcctgcc ggcctgtact
121 ggggaggggg caccccctcc ctgcaggggc atcttgggct ctctccagag ttcttccatt
181 cgtctgcttc ctgtctcggc agcccggccc cggctccacg gggtgtctca ccctccccac
241 cacaccctct ctggtgtcag gcccacctct ggttatgcct ccgcctcgtt gccctgaaag
301 ccgcagcgac agcgaaaagg gctaagattc ggccatgagc agcgcccctc ggcgccccgc
361 caagggcgca gattctttct gtacgccaga gccaggacgg aagcctcgaa ggcgcccggg
421 agcctccccg actggagaaa ccccgaccat tgaggagggg gaggaagatg aggatgaggc
481 cagcgaggct gagggggccc gggctctcac tcagccgtcc cctgtctcca caccctcctc
541 ggtgcagttc tttctccaag aggatgacag tgctgaccgg aaggcagaga ggaccagtcc
601 atcttcccct gcaccactgc cccaccagga ggcgactcct cgggcctcca aaggggccca
661 ggctggaacc caggtggagg aggcggaggc ggaggcggtg gcggtggcca gtggcactgc
721 agggggtgac gacgggggtg cctcggggcg ccacctgccc aaagcccagc ctgggcaccg
781 cagctacaac cttcaggaga ggaggcgcat cgggagcatg actggggctg agcaggcact
841 gctgccccgg gtccccacgg atgagattga ggcccagacg ctggccacgg ccgacctaga
901 cctcatgaag agtcaccggt ttgaggacgt tcctggggtg cggcggcact tggtgcggaa
961 gaatgccaaa ggttccacac agagtggccg agaagggcgg gagcctggcc ccacacctcg
1021 ggcccgaccc cgggcccccc acaagcccca tgaggtgttt gtggagctga atgagttgct
1081 cctggacaaa aaccaggagc cccagtggcg ggagacagct cgctggatca aatttgaaga
1141 ggacgtggag gaggagaccg agcgctgggg gaagccccac gtggcctccc tctccttccg
1201 cagtctcctg gagctccgca ggaccctggc ccatggggct gtgctcttgg atctggacca
1261 gcagaccctg cccggagtgg cccaccaggt ggtggagcag atggtcatct ctgaccagat
1321 caaggccgag gacagggcca acgtgctgcg ggctctgctg ttgaaacaca gccacccaag
1381 tgatgagaag gacttctcct tcccccgcaa catctcagct ggctccctgg gctccctgct
1441 ggggcatcac catggtcagg gggctgagag tgacccccac gtcaccgagc ctctcatggg
1501 aggtgttcct gagacccggc tggaggtgga gcgagagcgt gagctgccgc ctccagcacc
1561 accagctggc atcacccgct ccaagtccaa gcacgagctg aaactgctgg agaagattcc
1621 tgagaatgcc gaggccacgg tggtccttgt gggctgcgtg gagttcctct cccgccccac
1681 catggccttt gtgcggctcc gggaggctgt ggagttggac gcagtgttgg aggtgccggt
1741 gcctgtgcgt ttcctcttcc tgctgctggg cccgagtagt gccaacatgg actaccacga
1801 gatcggccgc tccatctcca ccctcatgtc agacaagcaa ttccacgagg cagcctacct
1861 ggctgacgag cgggaggacc tgctgacggc catcaacgcc ttcctggact gcagcgtggt
1921 gctgccgcct tcagaagtgc agggcgagga gctgctgcgc tctgtggccc acttccagcg
1981 ccagatgctc aagaagcgag aggagcaggg ccggctgcta cctacagggg ctgggctgga
2041 gcccaaatct gcccaagata aggcgctcct gcagatggta gaggcggcag gggcagctga
2101 agatgatccc cttcggcgga cggggcggcc ctttgggggg ctgatccgag atgtgcggcg
2161 ccgctatccc cactacctga gtgacttccg agatgcactt gaccctcagt gcctggccgc
2221 agtcatcttc atctactttg ccgccctgtc tcctgccatc acctttgggg ggctgctggg
2281 agagaagaca caggacctga taggggtgtc ggagctgatt atgtccacag cgctccaggg
2341 cgtggtcttc tgcctgctgg gtgcccagcc cctgttggtg atcggcttct cagggcccct
2401 gctggtcttt gaggaggcct tcttctcgtt ctgtagcagc aaccacctgg agtacctggt
2461 gggccgtgtg tggatcggct tctggctggt gttcctggcc ctgctcatgg tggccctgga
2521 ggggagcttc ctggtccgct tcgtctcccg cttcacccag gagatcttcg ccttcttgat
2581 ctcactcatc ttcatctatg agaccttcta caagctggtg aagatcttcc aggagcaccc
2641 cctgcatggc tgctcagcct ccaacagctc agaggtggac ggcggtgaga acatgacatg
2701 ggccggggca agacccacgc tggggccggg caacaggagc ttggctgggc agtctgggca
2761 ggggaagccc cggggccagc ccaacacggc cctgctgtcg ctggtgctca tggccggcac
2821 cttcttcatc gccttcttcc tgcgcaaatt caagaacagc cggttctttc ctggccggat
2881 ccggcgggtg attggggact ttggggtgcc catcgccatc ctcatcatgg tgcttgtgga
2941 ttacagtatt gaggacacct atacccagaa gctgagcgtt cccagtggat tctcagtgac
3001 tgccccagaa aagaggggct gggtcatcaa ccccctggga gagaagagcc ccttccctgt
3061 gtggatgatg gttgcaagcc tgctgcccgc catcctggtc ttcattctca tcttcatgga
3121 gacacagatc accacgctca tcatctccaa gaaggagcgc atgctgcaga agggctccgg
3181 cttccacctg gacctgctgc tcatcgtggc aatgggcggc atctgtgccc tctttggcct
3241 gccctggttg gctgctgcca ctgtccgctc tgtcactcat gccaacgcgc tcactgtcat
3301 gagcaaggct gtggcacctg gggacaagcc caagattcag gaagtcaagg agcagcgggt
3361 gacggggctg ctggttgccc tgcttgtggg cctctccata gttatcgggg atctgctccg
3421 gcagatcccc ctggccgtgc tctttggaat tttcctgtac atgggagtca cctcccttaa
3481 cgggacccag ttctatgagc ggctgcatct gctgctcatg ccgcccaaac accacccaga
3541 tgtcacttac gtcaagaagg tccggaccct ccgtatgcac ctgttcacgg ccctgcagct
3601 gctctgcctg gccctgctct gggccgtcat gtccacagct gcctccctgg ccttcccctt
3661 catcctcatc ctcacagtgc cgctccgcat ggtggtgctc acccgtatct tcaccgaccg
3721 agagatgaaa tgtctggatg ctaacgaggc agagccggtg tttgatgagc gggagggtgt
3781 ggacgagtac aatgagatgc ccatgcctgt gtagccgcca ccgagggaca gtcgagggac
3841 cgatggacga ggggacaggc tggtgggatg gggttccccc tcccatgccc ctccctcctt
3901 tttatttaag tgaataattt aaagtcttct cctcccccac tgcccctgca gtaaagtgct
3961 ttggccccca aaaaaaaaaa agaaaaaaaa aaaaaaaa
//