LOCUS BC028596 2937 bp mRNA linear HUM 16-AUG-2007
DEFINITION Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II,
gamma, mRNA (cDNA clone MGC:32959 IMAGE:4824916), complete cds.
ACCESSION BC028596
VERSION BC028596.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2937)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2937)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC028596.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059743.
FEATURES Location/Qualifiers
source 1..2937
/db_xref="H-InvDB:HIT000040583"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32959 IMAGE:4824916"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2937
/gene="PIP4K2C"
/db_xref="GeneID:79837"
/db_xref="HGNC:HGNC:23786"
CDS 17..1282
/gene="PIP4K2C"
/codon_start=1
/product="phosphatidylinositol-5-phosphate 4-kinase, type
II, gamma"
/protein_id="AAH28596.1"
/db_xref="GeneID:79837"
/db_xref="HGNC:HGNC:23786"
/translation="MASSSVPPATVSAATAGPGPGFGFASKTKKKHFVQQKVKVFRAA
DPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSHFKFKE
YCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVIKEVSSEDIA
DMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHRKYD
LKGSLVSREASDKEKVKELPTLRDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEFLVQL
KIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGG
YIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTV
KHGAGAEISTVHPEQYAKRFLDFITNIFA"
BASE COUNT 688 a 759 c 712 g 778 t
ORIGIN
1 ggttgcgcgg gagactatgg cgtcctcctc ggtcccacca gccacggtat cggcggcgac
61 agcaggcccc ggcccaggtt tcggcttcgc ctccaagacc aagaagaagc atttcgtgca
121 gcagaaggtg aaggtgttcc gggcggccga cccgctggtg ggtgtgttcc tgtggggcgt
181 agcccactcg atcaatgagc tcagccaggt gcctcccccg gtgatgctgc tgccagatga
241 ctttaaggcc agctccaaga tcaaggtcaa caatcacctt ttccacaggg aaaatctgcc
301 cagtcatttc aagttcaagg agtattgtcc ccaggtcttc aggaacctcc gtgatcgatt
361 tggcattgat gaccaagatt acttggtgtc ccttacccga aaccccccca gcgaaagtga
421 aggcagtgat ggtcgcttcc ttatctccta cgatcggact ctggtcatca aagaagtatc
481 cagtgaggac attgctgaca tgcatagcaa cctctccaac tatcaccagt acattgtgaa
541 gtgccatggc aacacgcttc tgccccagtt cctggggatg taccgagtca gtgtggacaa
601 cgaagacagc tacatgcttg tgatgcgcaa tatgtttagc caccgtcttc ctgtgcacag
661 gaagtatgac ctcaagggtt ccctagtgtc ccgggaagcc agcgataagg aaaaggttaa
721 agaattgccc acccttaggg atatggactt tctcaacaag aaccagaaag tatatattgg
781 tgaagaggag aagaaaatat ttctggagaa gctgaagaga gatgtggagt ttctagtgca
841 gctgaagatc atggactaca gccttctgct aggcatccac gacatcattc ggggctctga
901 accagaggag gaagcgcccg tgcgggagga tgagtcagag gtggatgggg actgcagcct
961 gactggacct cctgctctgg tgggctccta tggcacctcc ccagagggta tcggaggcta
1021 catccattcc catcggcccc tgggcccagg agagtttgag tccttcattg atgtctatgc
1081 catccggagt gctgaaggag ccccccagaa ggaggtctac ttcatgggcc tcattgatat
1141 ccttacacag tatgatgcca agaagaaagc agctcatgca gccaaaactg tcaagcatgg
1201 ggctggggca gagatctcta ctgtccatcc ggagcagtat gctaagcgat tcctggattt
1261 tattaccaac atctttgcct aagagactgc ctggttctct ctgatgttca aggtggtggg
1321 gttctgagac acttggggga attgtgggga tattctagcc accagttctc ttcttccttt
1381 gctaaattca ggctgcaggc tccttccatc cagataactc catcctgtcg agtaggctct
1441 ttctgaccct cagaaataca ttgtcctttt tcctctttgc ccatttttct tccctctctt
1501 cctccccatg agaagtctgc ttgtagtatt agaatgttat tgttgactct ctcccaagtg
1561 ccttgatctt tgtaatatct cctgttgttt ctatgatata ggagctaggg gaagggggtt
1621 gtttgccttc ttcaggacct gactggacag atggacctgg ctcaagcaac tactctggat
1681 gcactttgct gtgtgggatg aactaaaagt gtctgaattt tgctgataac tttataaaac
1741 tcactatggc atgcttccct cctggtgggc cctaggatgg atgacactca agatactaca
1801 gatgtgggtg caggcatgca cacacacgat ggaatatggc cattcctaca caggtggggt
1861 agagagtggg tcagcagcct ggcacctcac agaggtggga cctaagagga ctcatgatta
1921 tgcagagaat tggattgggt ctctgtcata gattgagtaa tctcttccct tacctcaatt
1981 ccatctccac ccatctctac atctgggcac agcaacccag agatggccaa aagcattcaa
2041 gcctggggga agatgtttga ctattgctgc tcttcaccag aacctcacac ctctcctggg
2101 actggaaccc ttcagtgggt gtgtggccag ttttggaggc tggaatgatg ggccagggtg
2161 taggattcat tctccatgta aagtttcctt tcatcctgcc tagccatccc caaggtttat
2221 ttccagaaga aaggaatatc tctacttgga tcaattctgg tcatttcaag aggatggagg
2281 cctcaagtgt gggaacttcc cctactccct ggatgtgtgt acctagcaca cttccttctc
2341 ccaccccttt ttccagttgg atttgttttt ctgttctctt ctgtcctgtc ttatactgca
2401 actgtgtctc ctaggggaca gatggccttc tttgtcatct tcactctcca cccccagaga
2461 ggagtcagag ccataactca atcactcagc ccctccaaag atagttgatg tgtgataatc
2521 tcataatgtt gagaaccctg atgagataca ttgtcttcct ctccctacaa tgcctctggg
2581 gccaaggcac ccattcttct tgctatcctc catccccctt gaggcttcca cttttttttt
2641 ttttagacat aaagctgggc atcagcaact ggcctgtggt gatgcaaagc tgctttgctc
2701 tgtatctggc tggactgatc tgtctcacaa gaagccatga ggccataggg agaagctccc
2761 tctccccttc atcttctgct ccaaaggtgg tagcaagagg agtacccagt taggggttgg
2821 agcccccata taacatcttc ctgtcagaag actgatggat ctttttcatt ccaaccatct
2881 ccctttcccc cgatgaatgc aataaaactc tgtgacacca gcaaaaaaaa aaaaaaa
//