LOCUS BC028588 2462 bp mRNA linear HUM 01-NOV-2007
DEFINITION Homo sapiens RNA binding motif protein 46, mRNA (cDNA clone
MGC:27016 IMAGE:4830259), complete cds.
ACCESSION BC028588
VERSION BC028588.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2462)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2462)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028588.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: h Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222176.
FEATURES Location/Qualifiers
source 1..2462
/db_xref="H-InvDB:HIT000040579"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27016 IMAGE:4830259"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2462
/gene="RBM46"
/db_xref="GeneID:166863"
/db_xref="HGNC:HGNC:28401"
CDS 101..1702
/gene="RBM46"
/codon_start=1
/product="RNA binding motif protein 46"
/protein_id="AAH28588.1"
/db_xref="GeneID:166863"
/db_xref="HGNC:HGNC:28401"
/translation="MNEENIDGTNGCSKVRTGIQNEAALLALMEKTGYNMVQENGQRK
FGGPPPGWEGPPPPRGCEVFVGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRG
YAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIGAIPKEKKKEEILDE
MKKVTEGVVDVIVYPSATDKTKNRGFAFVEYESHRAAAMARRKLIPGTFQLWGHTIQV
DWADPEKEVDEETMQRVKVLYVRNLMISTTEETIKAEFNKFKPGAVERVKKLRDYAFV
HFFNREDAVAAMSVMNGKCIDGASIEVTLAKPVNKENTWRQHLNGQISPNSENLIVFA
NKEESHPKTLGKLPTLPARLNGQHSPSPPEVERCTYPFYPGTKLTPISMYSLKSNHFN
SAVMHLDYYCNKNNWAPPEYYLYSTTSQDGKVLLVYKIVIPAIANGSQSYFMPDKLCT
TLEDAKELAAQFTLLHLDYNFHRSSINSLSPVSATLSSGTPSVLPYTSRPYSYPGYPL
SPTISLANGSHVGQRLCISNQASFF"
BASE COUNT 817 a 390 c 484 g 771 t
ORIGIN
1 gctctgaccg actggtcccc taaacggtgg cggcggtttt tggtcgttgg gccccgggat
61 ttaggaccaa catttgaaga cccgaagggg aactgcaacc atgaatgaag aaaatataga
121 tggaacaaat ggatgcagta aagttcgaac tggtattcag aatgaagcag cattacttgc
181 tttgatggaa aagactggtt acaacatggt tcaggaaaat ggacaaagga aatttggcgg
241 tcctcctcca ggttgggaag gtccacctcc acctagaggc tgtgaagttt ttgtaggaaa
301 aatacctcgt gatatgtatg aagatgagtt agttcctgta tttgaaagag ctgggaagat
361 atatgaattt cgacttatga tggaatttag tggtgaaaat cgaggttatg cttttgtgat
421 gtacactaca aaagaagaag cccaattagc catcagaatt cttaataatt atgaaattcg
481 accagggaag tttattggtg tgtgtgtaag cctggataat tgtagattat ttattggagc
541 tattcccaag gaaaagaaga aagaagaaat tttagatgaa atgaagaaag ttacagaagg
601 agttgtagat gtcattgttt atccaagtgc aactgataag accaaaaatc gtggttttgc
661 atttgtggaa tatgaatctc acagagctgc tgctatggca aggaggaaac taattccagg
721 aacattccaa ctatggggcc acaccattca ggtagattgg gctgacccag agaaagaggt
781 ggatgaggaa accatgcaga gagttaaagt tctttatgta agaaatttaa tgatctcaac
841 tacagaggaa acaattaaag cagaattcaa taaatttaag cctggtgcag ttgaacgggt
901 aaagaaactt agagattatg cttttgttca ctttttcaac cgagaagatg cagtggctgc
961 catgtctgtt atgaatggaa aatgcattga tggagcaagt attgaggtaa cactagctaa
1021 accagtaaat aaagaaaaca cttggagaca gcatcttaat ggtcagatta gtccaaattc
1081 tgaaaatctg attgtgtttg ctaacaaaga agagagccac ccaaaaactc taggcaagct
1141 gccaactctt cctgctcgtc tcaatggtca gcatagccca agtccgcctg aagttgaaag
1201 atgcacttac cctttttatc ctggaacaaa gcttactcca attagtatgt attctttaaa
1261 atccaatcat tttaattctg cagtaatgca tttggattat tactgcaaca aaaataactg
1321 ggcaccacca gaatattatt tatattcaac aacaagtcaa gatgggaaag tactcttggt
1381 gtataagata gttattcctg ctattgcaaa tggatcccag agttacttca tgccagacaa
1441 actctgtact acgttagaag atgcaaagga actggcagcc cagtttacat tacttcattt
1501 ggactacaat ttccatcgca gctcaataaa tagtctttcc cctgttagtg ctaccctctc
1561 ttctgggact cccagcgtgc ttccttatac ttcaaggcct tattcttatc caggctatcc
1621 tttgtcacca acaatatcac ttgctaatgg cagccatgtt ggacagcggc tatgtatctc
1681 caatcaggcc tccttcttct gaagaaaata ctaacattag tatgaaaatt tgtgtaaatt
1741 tgtagtatga aaacttgcaa attaaaatat tgttttattt tagaatcggg tttgcatatt
1801 tggttttaaa aaggtattta ttccaaagta ctaaacatca gctataattc agaataacat
1861 ggagttgtag aatttataaa aatgcaaagt ttaaaaagtt attcagtggt ttctcttgat
1921 aaaggtacag caaactacta ttctttttaa acttctagga ttttcttcta ctttctgagt
1981 gggcaataga acctagtcat ttatgttttt tttttttttg cataatttta ctaaatagta
2041 tttcacaaat attaaagcac ttgaagacaa tggttatagt agatttgatt accaaggatc
2101 actatctgta ctggagatta gaacaattat atgaccagaa gcatctaacc attatgtaaa
2161 aagaaatgat gagacaaaaa gattaagata caaattttgt gcagtactaa agaaaaagca
2221 gtctaccatt gtggtccttg aaaataacta tagatatttt tgttatttgt tagacacaaa
2281 ttataatttt gttgttaatg tatttaagca ttttatagtt atgctttgtg tttttgatat
2341 tctttgtatt gttaataaca agtgttatgg gtttttaatg ttgaaatcat gtgttaattt
2401 ttgtacttga attcaaattt tttgacatta aatatgtgat gcttctaaaa aaaaaaaaaa
2461 aa
//