LOCUS BC028583 3866 bp mRNA linear HUM 09-SEP-2005 DEFINITION Homo sapiens SUMO1/sentrin specific peptidase 6, mRNA (cDNA clone MGC:26784 IMAGE:4838569), complete cds. ACCESSION BC028583 VERSION BC028583.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3866) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3866) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: o Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7662311. FEATURES Location/Qualifiers source 1..3866 /db_xref="H-InvDB:HIT000040575" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26784 IMAGE:4838569" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3866 /gene="SENP6" /gene_synonym="KIAA0797" /gene_synonym="SSP1" /gene_synonym="SUSP1" /db_xref="GeneID:26054" /db_xref="MIM:605003" CDS 224..3541 /gene="SENP6" /gene_synonym="KIAA0797" /gene_synonym="SSP1" /gene_synonym="SUSP1" /codon_start=1 /product="SENP6 protein" /protein_id="AAH28583.1" /db_xref="GeneID:26054" /db_xref="MIM:605003" /translation="MAAGKSGGSAGEITFLEALARSESKRDGGFKNNWSFDHEEESEG DTDKDGTNLLSVDEDEDSETSKGKKLNRRSEIVANSSGEFILKTYVRRNKSESFKTLK GNPIGLNMLSNNKKLSENTQNTSLCSGTVVHGRRFHHAHAQIPVVKTAAQRKEYPPHV QKVEINPVRLSRLQGVERIMKKTEESESQVEPEIKRKVQQKRHCSTYQPTPPLSPASK KCLTHLEDLQRNCRQAITLNESTGPLLRTSIHQNSGGQKSQNTGLTTKKFYGNNVEKV PIDIIVNCDDSKHTYLQTNGKVILPGAKIPKITNLKERKTSLSDLNDPIILSSDDDDD NDRTNRRESISPQPADSACSSPAPSTGKVEAALNENTCRAERELRSIPEDSELNTVTL PRKARMKDQFGNSIINTPLKRRKVFSQEPPDALALSCQSSFDSVILNCRSIRVGTLFR LLIEPVIFCLDFIKIQLDEPDHDPVEIILNTSDLTKCEWCNVRKLPVVFLQAIPAVYQ KLSIQLQMNKEDKVWNDCKGVNKLTNLEEQYIILIFQNGLDPPANMVFESIINEIGIK NNISNFFAKIPFEEANGRLVACTRTYEESIKGSCGQKENKIKTVSFESKIQLRSKQEF QFFDEEEETGENHTIFIGPVEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDF YLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRH VDIFEKDFIFVPLNEAAHWFLAVVCFPGLEKPKYEPNPHYHENAVIQKCSTVEDSCIS SSASEMESCSQNSSAKPVIKKMLNKKHCIAVIDSNPGQEESDPRYKRNICSVKYSVKK INHTASENEEFNKGESTSQKVADRTKSENGLQNESLSSTHHTDGLSKIRLNYSDESPE AGKMLEDELVDFSEDQDNQDDSSDDGFLADDNCSSEIGQWHLKPTICKQPCILLMDSL RGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDVMKGSNPKVPQQNNFSDCGVYVLQY VESFFENPILSFELPMNLANWFPPPRMRTKREEIRNIILKLQEDQSKEKRKHKDTYST EAPLGEGTEQYVNSISD" BASE COUNT 1369 a 687 c 800 g 1010 t ORIGIN 1 agcgtggggt ctcgctgccc gccagcccgc ggacaggccc gggcgcgcct ggcctgcctt 61 tgtataggcc cgtctgaacg tgggagcgca gcccgcctga cggctgagcc cgaggcccgc 121 aaccctgcgg cgtctaccct cctccggcgc ggcccctcat cccggcgagc acggcggcgg 181 tgtgggccat ggattaagaa ggaggcggcg tgggaggagg aagatggcgg ccggcaagag 241 cggcggtagc gcaggggaga ttacttttct ggaagctttg gctagatcag agtctaagag 301 agatggaggt tttaaaaata attggagctt tgatcatgaa gaagaaagtg aaggagatac 361 agataaagat gggacaaatc tgctcagtgt ggatgaagat gaggattctg aaacctcaaa 421 aggaaaaaag ttaaatcgtc gatctgaaat tgttgctaat agctctggtg aattcatctt 481 gaagacatat gtaagacgaa acaagtctga aagttttaaa actttgaaag gcaacccaat 541 tggacttaac atgttgagca acaataagaa attgagtgaa aatacgcaaa atacgtcatt 601 atgttctgga actgtagttc atggtagacg ttttcatcat gctcatgcac agataccagt 661 agtaaaaaca gcagcccaaa ggaaagaata cccacctcat gtccaaaaag ttgaaattaa 721 tcctgtaagg ttaagtcggc tccaaggtgt tgaacgtata atgaagaaaa cagaagagtc 781 cgaatcacaa gtggagcctg aaattaagag gaaagtacaa cagaaacggc actgtagtac 841 ctatcagcct actcctcctc tatctcctgc ttcaaaaaaa tgtttaaccc atttagagga 901 tttgcaaaga aattgcagac aagctattac tttgaatgag tctactggac cattattaag 961 aacgtcaatt catcagaatt ctggaggaca gaagtcacaa aacacaggat taacaaccaa 1021 gaagttttat ggcaacaatg tggaaaaggt tccaattgat attattgtga attgtgatga 1081 cagtaaacac acttatttac agactaatgg aaaagtcatt ttacctgggg caaaaatacc 1141 caaaatcaca aacttgaaag aaaggaaaac aagtttgtca gacctaaatg atccaatcat 1201 tttgtccagt gatgatgatg atgacaacga cagaactaac agaagagaaa gcatatctcc 1261 tcagcctgct gattcagcat gttcttcccc tgcaccatcc actggaaaag tagaagcagc 1321 gctaaatgaa aatacttgca gagcagagcg tgaactacga agcattccag aagactcaga 1381 gttaaataca gttacattgc caagaaaagc aagaatgaaa gaccagtttg gcaattctat 1441 tatcaacaca cctctgaaac gtcgtaaagt gttttctcaa gaacctccag atgctttagc 1501 tttaagctgc caaagttcct ttgacagtgt cattttaaac tgtcgaagta tacgagtagg 1561 aacactcttc cggctgttaa tagagcctgt aattttttgt ttagatttta tcaagataca 1621 gctagacgaa ccagaccatg atcctgtaga gattatatta aatacctctg atctaactaa 1681 atgtgaatgg tgtaatgtcc gaaaattacc tgtagtgttt cttcaagcaa ttccagcagt 1741 ttatcaaaag ctgagcatcc aactgcaaat gaataaggag gataaagttt ggaatgattg 1801 taaaggagta aataaattaa caaatttaga agaacaatat ataattttaa tttttcaaaa 1861 tggccttgat cctccggcaa atatggtatt tgaaagtatc attaatgaaa ttggtataaa 1921 gaataacatc tccaattttt ttgcgaaaat tccctttgaa gaagctaatg gcagacttgt 1981 tgcctgtaca agaacctatg aagagagcat caaaggaagt tgtgggcaaa aggaaaacaa 2041 aattaaaact gtatcatttg aatctaaaat acaacttaga agcaaacaag aatttcagtt 2101 ttttgatgaa gaagaagaaa ctggagaaaa ccacaccatc ttcattggcc cagtagaaaa 2161 gttgatagta tatccaccac ctccagctaa gggaggcatc tctgttacca atgaggacct 2221 gcactgtcta aatgaaggag aatttttaaa tgatgttatt atagactttt atttgaaata 2281 cttggtgctt gaaaaactga agaaggaaga cgctgaccga attcatatat tcagttcttt 2341 tttctataaa cgccttaatc agagagagag gagaaatcat gaaacaacta atctgtcaat 2401 acagcaaaaa cggcatggga gagtaaaaac atggacccgg cacgtagata tttttgagaa 2461 ggattttatt tttgtacccc ttaatgaagc tgcacactgg tttttggctg ttgtttgttt 2521 ccccggtttg gaaaaaccaa agtatgaacc taatcctcat taccatgaaa atgctgtcat 2581 acagaaatgt tcaactgtag aggacagttg tatttcttct tcagccagtg aaatggagag 2641 ttgttcacaa aactcttctg ccaagcctgt aattaagaag atgctaaaca aaaaacattg 2701 catagctgta attgattcca atcctgggca ggaagaaagt gaccctcgtt ataagagaaa 2761 catatgcagt gtaaaataca gtgtgaaaaa aataaatcat actgcgagtg aaaatgaaga 2821 attcaataaa ggagaatcta catcccagaa agttgctgat aggactaaaa gtgagaatgg 2881 cctacagaat gaaagtttaa gttccacaca tcatacagat ggcttaagca aaatcagact 2941 aaactatagc gatgaatcac ctgaagctgg taaaatgctt gaagatgaac tcgtcgactt 3001 ctcagaagat caggataacc aggatgatag cagtgacgat ggattcctcg ctgatgacaa 3061 ctgcagttca gaaataggac agtggcattt aaagcctact atctgtaaac aaccttgtat 3121 cctacttatg gactcactcc gaggcccttc tcggtcaaat gttgtcaaaa ttttaagaga 3181 gtatttagaa gtggaatggg aagttaaaaa aggaagcaaa agaagttttt ccaaagatgt 3241 tatgaagggc tctaatccaa aagtaccaca gcaaaacaac ttcagtgact gtggtgtata 3301 tgtattgcag tatgtagaga gcttttttga gaatccaatt ctcagttttg aactacctat 3361 gaatttggca aactggtttc ctccaccaag aatgagaaca aaaagagaag aaatccgaaa 3421 cataattctg aagctacagg aagatcagag caaagagaaa agaaagcata aggacactta 3481 ctcaacagaa gcacctttag gcgaaggaac agaacaatat gtcaatagta tctcagattg 3541 accatttctg ttacttgtca tttctacttt cagaaactaa atgactttca aatttgggta 3601 tagacaataa agaactgaag tgctcactac tcagtgattt ggaaattttg atgcttgtat 3661 aaatgtcaga taattaattt ccaaaggcgt atgtattaag taaaagtctg taaatatgtt 3721 aatgaggcca atttttccag catttataat tatttttttc acttgttagg aagcttttgt 3781 tatgtatttt ctgttaatag tacctaaaat tgcaacttct aaacccaaat aaaaagaaaa 3841 tatttatagg aaaaaaaaaa aaaaaa //