LOCUS BC028583 3866 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens SUMO1/sentrin specific peptidase 6, mRNA (cDNA clone
MGC:26784 IMAGE:4838569), complete cds.
ACCESSION BC028583
VERSION BC028583.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3866)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3866)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: o Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662311.
FEATURES Location/Qualifiers
source 1..3866
/db_xref="H-InvDB:HIT000040575"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26784 IMAGE:4838569"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3866
/gene="SENP6"
/gene_synonym="KIAA0797"
/gene_synonym="SSP1"
/gene_synonym="SUSP1"
/db_xref="GeneID:26054"
/db_xref="MIM:605003"
CDS 224..3541
/gene="SENP6"
/gene_synonym="KIAA0797"
/gene_synonym="SSP1"
/gene_synonym="SUSP1"
/codon_start=1
/product="SENP6 protein"
/protein_id="AAH28583.1"
/db_xref="GeneID:26054"
/db_xref="MIM:605003"
/translation="MAAGKSGGSAGEITFLEALARSESKRDGGFKNNWSFDHEEESEG
DTDKDGTNLLSVDEDEDSETSKGKKLNRRSEIVANSSGEFILKTYVRRNKSESFKTLK
GNPIGLNMLSNNKKLSENTQNTSLCSGTVVHGRRFHHAHAQIPVVKTAAQRKEYPPHV
QKVEINPVRLSRLQGVERIMKKTEESESQVEPEIKRKVQQKRHCSTYQPTPPLSPASK
KCLTHLEDLQRNCRQAITLNESTGPLLRTSIHQNSGGQKSQNTGLTTKKFYGNNVEKV
PIDIIVNCDDSKHTYLQTNGKVILPGAKIPKITNLKERKTSLSDLNDPIILSSDDDDD
NDRTNRRESISPQPADSACSSPAPSTGKVEAALNENTCRAERELRSIPEDSELNTVTL
PRKARMKDQFGNSIINTPLKRRKVFSQEPPDALALSCQSSFDSVILNCRSIRVGTLFR
LLIEPVIFCLDFIKIQLDEPDHDPVEIILNTSDLTKCEWCNVRKLPVVFLQAIPAVYQ
KLSIQLQMNKEDKVWNDCKGVNKLTNLEEQYIILIFQNGLDPPANMVFESIINEIGIK
NNISNFFAKIPFEEANGRLVACTRTYEESIKGSCGQKENKIKTVSFESKIQLRSKQEF
QFFDEEEETGENHTIFIGPVEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDF
YLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRH
VDIFEKDFIFVPLNEAAHWFLAVVCFPGLEKPKYEPNPHYHENAVIQKCSTVEDSCIS
SSASEMESCSQNSSAKPVIKKMLNKKHCIAVIDSNPGQEESDPRYKRNICSVKYSVKK
INHTASENEEFNKGESTSQKVADRTKSENGLQNESLSSTHHTDGLSKIRLNYSDESPE
AGKMLEDELVDFSEDQDNQDDSSDDGFLADDNCSSEIGQWHLKPTICKQPCILLMDSL
RGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDVMKGSNPKVPQQNNFSDCGVYVLQY
VESFFENPILSFELPMNLANWFPPPRMRTKREEIRNIILKLQEDQSKEKRKHKDTYST
EAPLGEGTEQYVNSISD"
BASE COUNT 1369 a 687 c 800 g 1010 t
ORIGIN
1 agcgtggggt ctcgctgccc gccagcccgc ggacaggccc gggcgcgcct ggcctgcctt
61 tgtataggcc cgtctgaacg tgggagcgca gcccgcctga cggctgagcc cgaggcccgc
121 aaccctgcgg cgtctaccct cctccggcgc ggcccctcat cccggcgagc acggcggcgg
181 tgtgggccat ggattaagaa ggaggcggcg tgggaggagg aagatggcgg ccggcaagag
241 cggcggtagc gcaggggaga ttacttttct ggaagctttg gctagatcag agtctaagag
301 agatggaggt tttaaaaata attggagctt tgatcatgaa gaagaaagtg aaggagatac
361 agataaagat gggacaaatc tgctcagtgt ggatgaagat gaggattctg aaacctcaaa
421 aggaaaaaag ttaaatcgtc gatctgaaat tgttgctaat agctctggtg aattcatctt
481 gaagacatat gtaagacgaa acaagtctga aagttttaaa actttgaaag gcaacccaat
541 tggacttaac atgttgagca acaataagaa attgagtgaa aatacgcaaa atacgtcatt
601 atgttctgga actgtagttc atggtagacg ttttcatcat gctcatgcac agataccagt
661 agtaaaaaca gcagcccaaa ggaaagaata cccacctcat gtccaaaaag ttgaaattaa
721 tcctgtaagg ttaagtcggc tccaaggtgt tgaacgtata atgaagaaaa cagaagagtc
781 cgaatcacaa gtggagcctg aaattaagag gaaagtacaa cagaaacggc actgtagtac
841 ctatcagcct actcctcctc tatctcctgc ttcaaaaaaa tgtttaaccc atttagagga
901 tttgcaaaga aattgcagac aagctattac tttgaatgag tctactggac cattattaag
961 aacgtcaatt catcagaatt ctggaggaca gaagtcacaa aacacaggat taacaaccaa
1021 gaagttttat ggcaacaatg tggaaaaggt tccaattgat attattgtga attgtgatga
1081 cagtaaacac acttatttac agactaatgg aaaagtcatt ttacctgggg caaaaatacc
1141 caaaatcaca aacttgaaag aaaggaaaac aagtttgtca gacctaaatg atccaatcat
1201 tttgtccagt gatgatgatg atgacaacga cagaactaac agaagagaaa gcatatctcc
1261 tcagcctgct gattcagcat gttcttcccc tgcaccatcc actggaaaag tagaagcagc
1321 gctaaatgaa aatacttgca gagcagagcg tgaactacga agcattccag aagactcaga
1381 gttaaataca gttacattgc caagaaaagc aagaatgaaa gaccagtttg gcaattctat
1441 tatcaacaca cctctgaaac gtcgtaaagt gttttctcaa gaacctccag atgctttagc
1501 tttaagctgc caaagttcct ttgacagtgt cattttaaac tgtcgaagta tacgagtagg
1561 aacactcttc cggctgttaa tagagcctgt aattttttgt ttagatttta tcaagataca
1621 gctagacgaa ccagaccatg atcctgtaga gattatatta aatacctctg atctaactaa
1681 atgtgaatgg tgtaatgtcc gaaaattacc tgtagtgttt cttcaagcaa ttccagcagt
1741 ttatcaaaag ctgagcatcc aactgcaaat gaataaggag gataaagttt ggaatgattg
1801 taaaggagta aataaattaa caaatttaga agaacaatat ataattttaa tttttcaaaa
1861 tggccttgat cctccggcaa atatggtatt tgaaagtatc attaatgaaa ttggtataaa
1921 gaataacatc tccaattttt ttgcgaaaat tccctttgaa gaagctaatg gcagacttgt
1981 tgcctgtaca agaacctatg aagagagcat caaaggaagt tgtgggcaaa aggaaaacaa
2041 aattaaaact gtatcatttg aatctaaaat acaacttaga agcaaacaag aatttcagtt
2101 ttttgatgaa gaagaagaaa ctggagaaaa ccacaccatc ttcattggcc cagtagaaaa
2161 gttgatagta tatccaccac ctccagctaa gggaggcatc tctgttacca atgaggacct
2221 gcactgtcta aatgaaggag aatttttaaa tgatgttatt atagactttt atttgaaata
2281 cttggtgctt gaaaaactga agaaggaaga cgctgaccga attcatatat tcagttcttt
2341 tttctataaa cgccttaatc agagagagag gagaaatcat gaaacaacta atctgtcaat
2401 acagcaaaaa cggcatggga gagtaaaaac atggacccgg cacgtagata tttttgagaa
2461 ggattttatt tttgtacccc ttaatgaagc tgcacactgg tttttggctg ttgtttgttt
2521 ccccggtttg gaaaaaccaa agtatgaacc taatcctcat taccatgaaa atgctgtcat
2581 acagaaatgt tcaactgtag aggacagttg tatttcttct tcagccagtg aaatggagag
2641 ttgttcacaa aactcttctg ccaagcctgt aattaagaag atgctaaaca aaaaacattg
2701 catagctgta attgattcca atcctgggca ggaagaaagt gaccctcgtt ataagagaaa
2761 catatgcagt gtaaaataca gtgtgaaaaa aataaatcat actgcgagtg aaaatgaaga
2821 attcaataaa ggagaatcta catcccagaa agttgctgat aggactaaaa gtgagaatgg
2881 cctacagaat gaaagtttaa gttccacaca tcatacagat ggcttaagca aaatcagact
2941 aaactatagc gatgaatcac ctgaagctgg taaaatgctt gaagatgaac tcgtcgactt
3001 ctcagaagat caggataacc aggatgatag cagtgacgat ggattcctcg ctgatgacaa
3061 ctgcagttca gaaataggac agtggcattt aaagcctact atctgtaaac aaccttgtat
3121 cctacttatg gactcactcc gaggcccttc tcggtcaaat gttgtcaaaa ttttaagaga
3181 gtatttagaa gtggaatggg aagttaaaaa aggaagcaaa agaagttttt ccaaagatgt
3241 tatgaagggc tctaatccaa aagtaccaca gcaaaacaac ttcagtgact gtggtgtata
3301 tgtattgcag tatgtagaga gcttttttga gaatccaatt ctcagttttg aactacctat
3361 gaatttggca aactggtttc ctccaccaag aatgagaaca aaaagagaag aaatccgaaa
3421 cataattctg aagctacagg aagatcagag caaagagaaa agaaagcata aggacactta
3481 ctcaacagaa gcacctttag gcgaaggaac agaacaatat gtcaatagta tctcagattg
3541 accatttctg ttacttgtca tttctacttt cagaaactaa atgactttca aatttgggta
3601 tagacaataa agaactgaag tgctcactac tcagtgattt ggaaattttg atgcttgtat
3661 aaatgtcaga taattaattt ccaaaggcgt atgtattaag taaaagtctg taaatatgtt
3721 aatgaggcca atttttccag catttataat tatttttttc acttgttagg aagcttttgt
3781 tatgtatttt ctgttaatag tacctaaaat tgcaacttct aaacccaaat aaaaagaaaa
3841 tatttatagg aaaaaaaaaa aaaaaa
//