LOCUS BC028572 5006 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens FLYWCH-type zinc finger 1, mRNA (cDNA clone MGC:26050
IMAGE:4839062), complete cds.
ACCESSION BC028572
VERSION BC028572.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5006)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5006)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: p Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62953135.
FEATURES Location/Qualifiers
source 1..5006
/db_xref="H-InvDB:HIT000050950"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26050 IMAGE:4839062"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5006
/gene="FLYWCH1"
/db_xref="GeneID:84256"
/db_xref="HGNC:HGNC:25404"
CDS 365..2515
/gene="FLYWCH1"
/codon_start=1
/product="FLYWCH-type zinc finger 1"
/protein_id="AAH28572.1"
/db_xref="GeneID:84256"
/db_xref="HGNC:HGNC:25404"
/translation="MPLPEPSEQEGESVKAGQEPSPKPGTDVIPAAPRKPREFSKLVL
LTASDQDEDGVGSKPQEVHCVLSLEMAGPATLASTLQILPVEEQGGVVQPALEMPEQK
CSKLDAAAPQSLEFLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCRQHAELGCRGRAI
TRGLRATVMRGHCHAPDEQGLEARRQREKLPSLALPEGLGEPQGPEGPGGRVEEPLEG
VGPWQCPEEPEPTPGLVLSKPALEEEEAPRALSLLSLPPKKRSILGLGQARPLEFLRT
CYGGSFLVHESFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRVTVMRGHCHQPD
MEGLEARRQQEKAVETLQAGQDGPGSQVDTLLRGVDSLLYRRGPGPLTLTRPRPRKRA
KVEDQELPTQPEAPDEHQDMDADPGGPEFLKTPLGGSFLVYESFLYRREKAAGEKVYW
TCRDQARMGCRSRAITQGRRVTVMRGHCHPPDLGGLEALRQREKRPNTAQRGSPGGPE
FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRRHC
HPPDLGGLEALRQREHFPNLAQWDSPDPLRPLEFLRTSLGGRFLVHESFLYRKEKAAG
EKVYWMCRDQARLGCRSRAITQGHRIMVMRSHCHQPDLAGLGALRQRERLPTTAQQED
PEKIQVQLCFKTCSPESQQIYGDIKDVRLDGESQ"
BASE COUNT 948 a 1600 c 1602 g 856 t
ORIGIN
1 agcgggcggg gtcacggggc tcgctcccga ggggcaggtc ggggctggga gctggtgccc
61 gggtcggggt ggcggcggcg gcctgggccg cgaggtcgac gctcgctgct gcagcggcag
121 aggctaaagg atccgccgcg gcgctgtcgc cggagaggga gggccccgct gccgtcggtg
181 aaaccagccc agagaagtta cgggatttgc ccccggggct cctgcccagc aagccagcgc
241 cgtgacccag gtgtggggga tgatggtgac gcttctcact cacgtgtgaa ggacggaacc
301 actgcactcc aggttccctg ctgggtgctg agcgtggcct gagggacagg ccctgggtcc
361 cgggatgccc ctgcccgagc ccagcgagca ggagggcgag agtgtgaagg ccggccagga
421 gccatccccc aagccaggca cggacgtcat cccggcagcc cccaggaagc ccagggagtt
481 ctccaaactg gtgctgctca cagcctccga ccaagatgag gatggggtgg gatccaagcc
541 ccaggaagtg cactgcgtcc tgtccctgga gatggctggc cccgccaccc tcgccagcac
601 cttgcagatc ctgccagttg aggagcaggg aggggtggtc cagccagccc tagagatgcc
661 tgaacagaag tgcagcaagc tggatgcagc agcccctcag tccctggagt tcctgaggac
721 accattcggg ggccgcctcc tggtgctgga gtccttcctg tacaagcagg agaaggcagt
781 gggggacaag gtgtactgga agtgccgcca acatgctgag ctgggctgcc ggggccgggc
841 catcacccga ggcctgcggg ccacagtgat gcggggccac tgccacgcgc ccgatgagca
901 aggcctggag gcccggcgcc agagggagaa actgcccagc ctggccctgc cagagggctt
961 gggagagccc cagggtcctg agggccctgg aggccgagtg gaggagcccc tggagggggt
1021 gggcccgtgg cagtgccctg aggagcccga gcccactcct gggctggtgc tgagcaagcc
1081 ggccctggag gaggaggagg caccccgagc cctgtcactg ctgagcctgc cgcccaagaa
1141 gcgctcgatc ctggggctgg gacaggcccg gcccctcgag ttcctgagga cgtgctacgg
1201 gggcagcttc ctggtacacg agtcgttcct ctacaagcgg gagaaggctg tcggggacaa
1261 ggtgtattgg acctgccggg accacgcgct gcacggctgc cggagccggg ccatcaccca
1321 gggacagcgg gtgactgtga tgcgtgggca ctgccaccag cccgatatgg agggcctgga
1381 agcccggcgg cagcaggaga aggccgtgga gacgctgcag gctgggcagg acggccctgg
1441 gagccaagtg gacacgctgc tccgaggcgt ggatagtttg ctctaccgca ggggtccggg
1501 tcccctgact ctcaccaggc ctcggcccag aaagcgagca aaggttgaag accaggagct
1561 gccaacccag cccgaggccc cagacgagca ccaggacatg gacgcagacc cgggaggccc
1621 tgagttcctg aagacgcccc tggggggcag cttcctggtg tacgagtcct tcctctaccg
1681 gcgggagaag gcggctgggg agaaggtgta ttggacctgc cgggaccagg cccgcatggg
1741 ctgccgcagc cgcgccatca cccagggccg acgggtgact gtcatgcgtg gtcactgcca
1801 cccgcccgac ctgggaggcc tggaggccct gaggcagcgg gagaaacgcc ccaacacggc
1861 gcagcggggg agcccaggag gccccgagtt cctgaagacg cccctggggg gcagcttcct
1921 ggtgtacgag tccttcctct accggcggga gaaggcggcc ggggagaagg tgtattggac
1981 ctgccgggac caggcccgca tgggctgccg cagccgcgcc atcacccagg gccggcgggt
2041 catggtcatg cgcaggcact gccacccacc agacctgggc ggcctggagg ccctgcggca
2101 gcgggagcac ttccccaacc tggcgcagtg ggacagccca gatcctctcc ggcccctgga
2161 gttcctgagg acttccctgg ggggcaggtt cctggtgcac gagtccttcc tctacaggaa
2221 ggagaaggcg gctggggaga aggtgtactg gatgtgccgg gaccaggctc ggctgggctg
2281 ccgcagccgc gccataaccc agggccaccg catcatggtc atgcgcagcc actgccatca
2341 gcctgacctg gcaggcctgg gggccttgag gcaacgggag cggctcccca ccacggccca
2401 gcaggaggac ccagaaaaga ttcaagttca gctgtgcttc aagacgtgtt ctcctgaaag
2461 ccagcagatt tatggggaca tcaaagacgt cagactggat ggcgagtccc agtgaggcga
2521 tgtgggcaga ggagctccga gccgcccacc caaggtggct tcacatccac acaggcactt
2581 cccatccacc taggtttggc ttagcagaaa cttcttttca ttcttccaaa gcatcgatgg
2641 tcttcgcgtc tcctcaggag gtctcccagg aggaattctt ggatggtgtc ctcatgtcgg
2701 cggagaacag tgctcagagc tggcgcttgc agacgcagct gtcgtggggc agggcggtgg
2761 cgccttcctg acctttggaa gacatgacaa agctgcctgg acacggacgc ccctgctgta
2821 cggccacagc acccctgggt ttgcagagca cgcagccttc ctagggcttt ccacctggcg
2881 aggccccgct ctgctcagca cggtgcaaag tgaatgctgc tgtcttggag cctgggcacg
2941 tttggggaag ttcctgcttc aaactgagct gccccgcata ggccaggtca acccacacca
3001 atctcttctg gacaggtgct gggtaggcct tcctggtctc tggccgcctg ctgccagggt
3061 gtggccatcc ccagcaaccg gagctggcca aaccagaggc ctcgctccgc actccacact
3121 ttcctttctg tgctccttcc aagttaaatt aaaccccctc tccacgattc ccacggcagg
3181 cgtcattccc gagatgggag ccagtccagg ggtcagcagg agccagcgct gggcacacgt
3241 gccctggctg aggccagcgg catcctgggt ggcccaggtc catcctgggc agcaaaggcg
3301 tgtccccttc tgtcagacag cttcacagag tgtggcttca ccagtcagag ggagcagtcc
3361 ggagaggcaa gatgacccca ccgggactgc agagcctcct ccttactaac aaggacctgt
3421 ccgcagccgc gaggtccttc actcccaccc tgtaattgtg gggggagtgc cagcaacagg
3481 cctgtcccct ggcaagttgg ccacggaacc caccatgcac tgcaaggctg tgacagcctg
3541 ggcacccctg cttctcctct gcttgtacgg ttcccccaat aaatcctatt ttccatctca
3601 ccgtgtggag ctggtacttg ttcacatccc tcttgcagca acagttggcc gccgtgaaac
3661 cacactccgt cacatctcca tgccagtgcc cagggggaga cccctcccaa tgcctgggct
3721 gttacagtca cctggcccag acgtaacctg gaccaagagt ggacggagac acctggggtt
3781 ggggcctctg gaagggctgc tggggggcca gctgcagcct gtggcctctc ccaggcccgg
3841 atatggcagg acatttgcgt cgtgttgctg gaagaggcag gatgctctgt tctcgccatt
3901 agcctgcgtt acgcctagac tcatctgcat aagcctgggc aagtggcacc cctgggccaa
3961 gggcagactt gcccacccgt ccatcctttg cctatggcag aggacacaca acacagtggc
4021 tgcgctttgg gcactgttct cggccctgaa gcatcctgcc ccgaggctga cctaactgcc
4081 cccagctgga ctcatggcca aggctacaga cccagtactc caatcccgac tcccactgtg
4141 tggtccaaat gtgtacgccc acaggaggca gccatgcccg aggaaggtac ttgctgaaag
4201 atggtccagt tcatgccgcc accagctgga cctctgatca ggccccctgc agaaggggaa
4261 gctctccaca tgcccaagat acgagagaaa cgcccgggtc acagcagcct gagtcactgc
4321 agcctctgct acctgccaag cctgcgccct ccacctgtgg gctccttgcc tctgtgatgg
4381 ggcctccacg gccagcatct tcccgccatg gtcacatgat gccatgccct gctctgggca
4441 cccctaagcg ggtatgaggc gaatcagagg aagaatatcg gcttctcttc ccttttggat
4501 atttgcgtca ttgaccggga ctggcccact cttcctctgc ctcacgcctg ctttgacctt
4561 agaagacaga cggcagctcg cgttgctggg ctgagattct ccaatggacg tgaatttaga
4621 tgatgctgtt gccttgggtg gcttcatggc caccaacccg caccctggtg gccactcagc
4681 catgacaagg gcctgacagc cactaagtga gcttcagagc cttccccttg cagagttcca
4741 gggccaccag atgtcgcctg cccagtcact gtcacagagt taaagcgtgc gggtgaacgc
4801 tggccgcgga gcgtgcagcc cggcagcagc tcagcggggc agctcctgct tccagccctg
4861 cctctgctgg tgcttcgccc acaaaccctg ctgtatgaca tttgcaccac atggtgtgtg
4921 tccgtgccct ttgacatgac agtgccaaca acatctcatg aaatttaaaa taaatcccca
4981 aggcatcaag aaaaaaaaaa aaaaaa
//