LOCUS BC028572 5006 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens FLYWCH-type zinc finger 1, mRNA (cDNA clone MGC:26050 IMAGE:4839062), complete cds. ACCESSION BC028572 VERSION BC028572.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5006) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5006) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: p Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62953135. FEATURES Location/Qualifiers source 1..5006 /db_xref="H-InvDB:HIT000050950" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26050 IMAGE:4839062" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..5006 /gene="FLYWCH1" /db_xref="GeneID:84256" /db_xref="HGNC:HGNC:25404" CDS 365..2515 /gene="FLYWCH1" /codon_start=1 /product="FLYWCH-type zinc finger 1" /protein_id="AAH28572.1" /db_xref="GeneID:84256" /db_xref="HGNC:HGNC:25404" /translation="MPLPEPSEQEGESVKAGQEPSPKPGTDVIPAAPRKPREFSKLVL LTASDQDEDGVGSKPQEVHCVLSLEMAGPATLASTLQILPVEEQGGVVQPALEMPEQK CSKLDAAAPQSLEFLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCRQHAELGCRGRAI TRGLRATVMRGHCHAPDEQGLEARRQREKLPSLALPEGLGEPQGPEGPGGRVEEPLEG VGPWQCPEEPEPTPGLVLSKPALEEEEAPRALSLLSLPPKKRSILGLGQARPLEFLRT CYGGSFLVHESFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRVTVMRGHCHQPD MEGLEARRQQEKAVETLQAGQDGPGSQVDTLLRGVDSLLYRRGPGPLTLTRPRPRKRA KVEDQELPTQPEAPDEHQDMDADPGGPEFLKTPLGGSFLVYESFLYRREKAAGEKVYW TCRDQARMGCRSRAITQGRRVTVMRGHCHPPDLGGLEALRQREKRPNTAQRGSPGGPE FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRRHC HPPDLGGLEALRQREHFPNLAQWDSPDPLRPLEFLRTSLGGRFLVHESFLYRKEKAAG EKVYWMCRDQARLGCRSRAITQGHRIMVMRSHCHQPDLAGLGALRQRERLPTTAQQED PEKIQVQLCFKTCSPESQQIYGDIKDVRLDGESQ" BASE COUNT 948 a 1600 c 1602 g 856 t ORIGIN 1 agcgggcggg gtcacggggc tcgctcccga ggggcaggtc ggggctggga gctggtgccc 61 gggtcggggt ggcggcggcg gcctgggccg cgaggtcgac gctcgctgct gcagcggcag 121 aggctaaagg atccgccgcg gcgctgtcgc cggagaggga gggccccgct gccgtcggtg 181 aaaccagccc agagaagtta cgggatttgc ccccggggct cctgcccagc aagccagcgc 241 cgtgacccag gtgtggggga tgatggtgac gcttctcact cacgtgtgaa ggacggaacc 301 actgcactcc aggttccctg ctgggtgctg agcgtggcct gagggacagg ccctgggtcc 361 cgggatgccc ctgcccgagc ccagcgagca ggagggcgag agtgtgaagg ccggccagga 421 gccatccccc aagccaggca cggacgtcat cccggcagcc cccaggaagc ccagggagtt 481 ctccaaactg gtgctgctca cagcctccga ccaagatgag gatggggtgg gatccaagcc 541 ccaggaagtg cactgcgtcc tgtccctgga gatggctggc cccgccaccc tcgccagcac 601 cttgcagatc ctgccagttg aggagcaggg aggggtggtc cagccagccc tagagatgcc 661 tgaacagaag tgcagcaagc tggatgcagc agcccctcag tccctggagt tcctgaggac 721 accattcggg ggccgcctcc tggtgctgga gtccttcctg tacaagcagg agaaggcagt 781 gggggacaag gtgtactgga agtgccgcca acatgctgag ctgggctgcc ggggccgggc 841 catcacccga ggcctgcggg ccacagtgat gcggggccac tgccacgcgc ccgatgagca 901 aggcctggag gcccggcgcc agagggagaa actgcccagc ctggccctgc cagagggctt 961 gggagagccc cagggtcctg agggccctgg aggccgagtg gaggagcccc tggagggggt 1021 gggcccgtgg cagtgccctg aggagcccga gcccactcct gggctggtgc tgagcaagcc 1081 ggccctggag gaggaggagg caccccgagc cctgtcactg ctgagcctgc cgcccaagaa 1141 gcgctcgatc ctggggctgg gacaggcccg gcccctcgag ttcctgagga cgtgctacgg 1201 gggcagcttc ctggtacacg agtcgttcct ctacaagcgg gagaaggctg tcggggacaa 1261 ggtgtattgg acctgccggg accacgcgct gcacggctgc cggagccggg ccatcaccca 1321 gggacagcgg gtgactgtga tgcgtgggca ctgccaccag cccgatatgg agggcctgga 1381 agcccggcgg cagcaggaga aggccgtgga gacgctgcag gctgggcagg acggccctgg 1441 gagccaagtg gacacgctgc tccgaggcgt ggatagtttg ctctaccgca ggggtccggg 1501 tcccctgact ctcaccaggc ctcggcccag aaagcgagca aaggttgaag accaggagct 1561 gccaacccag cccgaggccc cagacgagca ccaggacatg gacgcagacc cgggaggccc 1621 tgagttcctg aagacgcccc tggggggcag cttcctggtg tacgagtcct tcctctaccg 1681 gcgggagaag gcggctgggg agaaggtgta ttggacctgc cgggaccagg cccgcatggg 1741 ctgccgcagc cgcgccatca cccagggccg acgggtgact gtcatgcgtg gtcactgcca 1801 cccgcccgac ctgggaggcc tggaggccct gaggcagcgg gagaaacgcc ccaacacggc 1861 gcagcggggg agcccaggag gccccgagtt cctgaagacg cccctggggg gcagcttcct 1921 ggtgtacgag tccttcctct accggcggga gaaggcggcc ggggagaagg tgtattggac 1981 ctgccgggac caggcccgca tgggctgccg cagccgcgcc atcacccagg gccggcgggt 2041 catggtcatg cgcaggcact gccacccacc agacctgggc ggcctggagg ccctgcggca 2101 gcgggagcac ttccccaacc tggcgcagtg ggacagccca gatcctctcc ggcccctgga 2161 gttcctgagg acttccctgg ggggcaggtt cctggtgcac gagtccttcc tctacaggaa 2221 ggagaaggcg gctggggaga aggtgtactg gatgtgccgg gaccaggctc ggctgggctg 2281 ccgcagccgc gccataaccc agggccaccg catcatggtc atgcgcagcc actgccatca 2341 gcctgacctg gcaggcctgg gggccttgag gcaacgggag cggctcccca ccacggccca 2401 gcaggaggac ccagaaaaga ttcaagttca gctgtgcttc aagacgtgtt ctcctgaaag 2461 ccagcagatt tatggggaca tcaaagacgt cagactggat ggcgagtccc agtgaggcga 2521 tgtgggcaga ggagctccga gccgcccacc caaggtggct tcacatccac acaggcactt 2581 cccatccacc taggtttggc ttagcagaaa cttcttttca ttcttccaaa gcatcgatgg 2641 tcttcgcgtc tcctcaggag gtctcccagg aggaattctt ggatggtgtc ctcatgtcgg 2701 cggagaacag tgctcagagc tggcgcttgc agacgcagct gtcgtggggc agggcggtgg 2761 cgccttcctg acctttggaa gacatgacaa agctgcctgg acacggacgc ccctgctgta 2821 cggccacagc acccctgggt ttgcagagca cgcagccttc ctagggcttt ccacctggcg 2881 aggccccgct ctgctcagca cggtgcaaag tgaatgctgc tgtcttggag cctgggcacg 2941 tttggggaag ttcctgcttc aaactgagct gccccgcata ggccaggtca acccacacca 3001 atctcttctg gacaggtgct gggtaggcct tcctggtctc tggccgcctg ctgccagggt 3061 gtggccatcc ccagcaaccg gagctggcca aaccagaggc ctcgctccgc actccacact 3121 ttcctttctg tgctccttcc aagttaaatt aaaccccctc tccacgattc ccacggcagg 3181 cgtcattccc gagatgggag ccagtccagg ggtcagcagg agccagcgct gggcacacgt 3241 gccctggctg aggccagcgg catcctgggt ggcccaggtc catcctgggc agcaaaggcg 3301 tgtccccttc tgtcagacag cttcacagag tgtggcttca ccagtcagag ggagcagtcc 3361 ggagaggcaa gatgacccca ccgggactgc agagcctcct ccttactaac aaggacctgt 3421 ccgcagccgc gaggtccttc actcccaccc tgtaattgtg gggggagtgc cagcaacagg 3481 cctgtcccct ggcaagttgg ccacggaacc caccatgcac tgcaaggctg tgacagcctg 3541 ggcacccctg cttctcctct gcttgtacgg ttcccccaat aaatcctatt ttccatctca 3601 ccgtgtggag ctggtacttg ttcacatccc tcttgcagca acagttggcc gccgtgaaac 3661 cacactccgt cacatctcca tgccagtgcc cagggggaga cccctcccaa tgcctgggct 3721 gttacagtca cctggcccag acgtaacctg gaccaagagt ggacggagac acctggggtt 3781 ggggcctctg gaagggctgc tggggggcca gctgcagcct gtggcctctc ccaggcccgg 3841 atatggcagg acatttgcgt cgtgttgctg gaagaggcag gatgctctgt tctcgccatt 3901 agcctgcgtt acgcctagac tcatctgcat aagcctgggc aagtggcacc cctgggccaa 3961 gggcagactt gcccacccgt ccatcctttg cctatggcag aggacacaca acacagtggc 4021 tgcgctttgg gcactgttct cggccctgaa gcatcctgcc ccgaggctga cctaactgcc 4081 cccagctgga ctcatggcca aggctacaga cccagtactc caatcccgac tcccactgtg 4141 tggtccaaat gtgtacgccc acaggaggca gccatgcccg aggaaggtac ttgctgaaag 4201 atggtccagt tcatgccgcc accagctgga cctctgatca ggccccctgc agaaggggaa 4261 gctctccaca tgcccaagat acgagagaaa cgcccgggtc acagcagcct gagtcactgc 4321 agcctctgct acctgccaag cctgcgccct ccacctgtgg gctccttgcc tctgtgatgg 4381 ggcctccacg gccagcatct tcccgccatg gtcacatgat gccatgccct gctctgggca 4441 cccctaagcg ggtatgaggc gaatcagagg aagaatatcg gcttctcttc ccttttggat 4501 atttgcgtca ttgaccggga ctggcccact cttcctctgc ctcacgcctg ctttgacctt 4561 agaagacaga cggcagctcg cgttgctggg ctgagattct ccaatggacg tgaatttaga 4621 tgatgctgtt gccttgggtg gcttcatggc caccaacccg caccctggtg gccactcagc 4681 catgacaagg gcctgacagc cactaagtga gcttcagagc cttccccttg cagagttcca 4741 gggccaccag atgtcgcctg cccagtcact gtcacagagt taaagcgtgc gggtgaacgc 4801 tggccgcgga gcgtgcagcc cggcagcagc tcagcggggc agctcctgct tccagccctg 4861 cctctgctgg tgcttcgccc acaaaccctg ctgtatgaca tttgcaccac atggtgtgtg 4921 tccgtgccct ttgacatgac agtgccaaca acatctcatg aaatttaaaa taaatcccca 4981 aggcatcaag aaaaaaaaaa aaaaaa //