LOCUS BC028418 3463 bp mRNA linear HTC 09-SEP-2005
DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 2, mRNA
(cDNA clone IMAGE:4824255), with apparent retained intron.
ACCESSION BC028418
VERSION BC028418.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3463)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3463)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: l Column: 4
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3463
/db_xref="H-InvDB:HIT000091601"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4824255"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 729 a 1078 c 1034 g 622 t
ORIGIN
1 agcggaggag tatgagagct tctcctccga gcaggaggca agtgacgacg ccgtgcaggg
61 gcaggacttg gacgaggacg actttgacgt ggggaagccg aagaagcagc ggagatcgat
121 tgtaagaacg acgtccatga ccaggcaaca gaacttcaag cagaaagtgg tagcgctgct
181 gcggaggttc aaagtgtccg acgaggtcct ggactcggag caggaccctg cggagcacat
241 ccccgaggca gaggaggacc tggacctcct gtatgacacc ctggacatgg agcaccccag
301 cgacagcggc cccgacatgg aggatgacga cagcgtcctc agcaccccca agccgaagct
361 gcggccatac tttgaaggcc tgtcgcactc gagctcgcag acggagattg ggagcatcca
421 cagcgcccgc agccacaagg agcccaagcc cggctgacgt gcccgagaag acgcggtccc
481 tgggaggcag gcagccgagc gacagtgtct ctgacacggt ggccctcggt gtgccaggcc
541 cgagggagca ccctggacag cctgaggaca gccccgaggc tgaggcctcc accctggatg
601 tgttcacgga gaggctgccg cccagcggga ggatcaccaa gacagagtcc cttgtcatcc
661 cctccaccag gtccgagggg aagcaggctg gccgacgggg ccggagcaca tccttgaagg
721 agcggcaggc agcacggccc cagaatgaac gggccaacag cctggacaac gagcgctgcc
781 cggacgcccg gagccagcta cagatcccca ggaagactgt gtatgaccag ctcaaccaca
841 tcctcatctc cgatgaccag cttcccgaaa acatcatcct tgtcaacacc tcggactggc
901 aggggcagtt cctctccgac gtcctgcaga ggcacacgct ccccgtggtg tgcacgtgct
961 ctcctgcgga cgtccaggcg gccttcagca ccatcgtctc acggatacag agatactgca
1021 actgcaattc ccagcccccg acccccgtga agatcgccgt ggcgggagcg cagcattacc
1081 tcagtgccat cctgcggctc tttgtggagc agctgtccca caagacaccc gactggctcg
1141 gctacatgcg cttcctggtc atcccactgg gtgagcacca cgccgtccac ctgggcctgg
1201 gcacagatgc cacgggcagt gtggcgtggc atggagtggt gtggcgtggc gtggcgtgtt
1261 gtgtggcgtg gcgtggcgcg gtgtgtcgtg gtgtggcgcg gtgtggcatg gcgtggtgtc
1321 cctgcttgct acacatttgt tgtttttaaa tgtttgtttg atacagtaac actttgttaa
1381 ttttaattat atgcaagata acttgattgc cctaaaacag ccatttgggt caagataaag
1441 ccatcgccct ctgaaggggc ctgagctggg tgtctcctcc atcagtcgct gtgataactc
1501 tatgccagtt tcgatttcca aagtcagaag tgcaaagcag ggctcgttat taatcctctc
1561 aaatcgtcca ggtcctgtgt cgtcgaactc cattacttct ttaggtccat acgatgtgtc
1621 ttaccacgaa acaaacccac ccagccttaa tctgttgacc agcagcaagg cctggaggcg
1681 acacctctcc cgtgtggccc tcacgatgcc gacgtcagag ccctgagcca gccgaggcct
1741 ctgcacggtc acatgtgccc tgctgggcct tcctcagtgg cactcagggc tctgggacct
1801 cagctcaggg ctggagctcc ttcagcgggg ccacaggcat ccaccaggga ggggcagtgg
1861 tggctttctc tttcggtggc aggaaagtgg gcttgtctgg aaggcagcag cacaggcctg
1921 gggtcgggtg gcccagcttt tgtgccgcgg tgggagcctt gcagctccga gtcccccgtg
1981 gtgacaccag ccccacccct ggcatgcagg ctcccacccc gtggccaggt acctaggctc
2041 cgtggactac cgctacaaca acttcttcca ggacctggcc tggagagacc tgttcaacaa
2101 gctggaggcc cagagtgcgg tacaggacac gccagacatt gtgtcacgca tcacgcagta
2161 catcgcaggg gccaactgtg cccaccagct ccccatcgca gaggccatgc tgacctacaa
2221 gcagaagagc cctgacgaag agtcctccca aaagttcatt ccctttgtcg gggttgtgaa
2281 ggttggaatt gtggagccat cctcggccac atcaggcgac tcggacgacg cggccccctc
2341 gggctctggc acgctctcct ccaccccgcc gtccgcatct cctgcggcca aggaggcctc
2401 acccaccccg ccctcctccc cgtcggtgag cggaggcctg tcctccccca gccagggtgt
2461 cggcgccgag ctgatggggc tgcaggtgga ctactggacg gcagcacagc ctgcggacag
2521 gaagagggac gccgagaaga aggacctgcc tgtcaccaaa aacacgctca agtgcacttt
2581 ccggtccctc caggtcagca ggctgcccag cagcggcgag gctgcagcca cgcccaccat
2641 gtccatgacc gtggtcacca aggagaagaa caagaaggtg atgtttctgc ccaagaaagc
2701 gaaggacaag gacgtggagt ctaagagcca gtgcattgag ggcatcagcc ggctcatctg
2761 cactgccagg cagcagcaga acatgctgcg ggtcctcatc gacggcgtgg agtgcagcga
2821 cgtcaagttc ttccagctgg ccgcgcagtg gtcctcgcac gtgaagcact tccccatctg
2881 catcttcgga cactccaagg ccaccttcta gccccaccca ccagggggcc cacctcctgc
2941 cccatgctgt gaggggccca gctgcatttc tgttaacatt tcagtttact acagagacag
3001 acgcttaaaa cacaaagaga aacagtctta agtatgaatg tgctcacaac gtggaaacta
3061 acgggggagc tcctgccagg agccgaataa ctgctctgct tattaacccg aacgttcggc
3121 ccggggctgg gaagccagaa ggacgatgct gagccatgga tcgcggaagg cgtcctctgg
3181 cctcaggagc cacccagagc ctcacaggct gagttcttgc ctctgtgtcc tgtccttcct
3241 ggaagtcagg actctgcttc ctcagggagc ccggggaagg cggagctcag tggccacagg
3301 ccgagggcca tggggccgct cagtcccgtt ggggttgtcc tgagttgagc ctgggggggc
3361 cgtcctgccc gcctaagaga tgcccccagc accgcacact cgtggttccc aataaactcc
3421 tgcctgcggc ggaggtttta tagcagcaaa aaaaaaaaaa aaa
//