LOCUS BC028400 3186 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 8 open reading frame 46, mRNA (cDNA clone
MGC:33510 IMAGE:4816822), complete cds.
ACCESSION BC028400
VERSION BC028400.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028400.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303955.
FEATURES Location/Qualifiers
source 1..3186
/db_xref="H-InvDB:HIT000040555"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33510 IMAGE:4816822"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3186
/gene="C8orf46"
/gene_synonym="MGC33510"
/db_xref="GeneID:254778"
/db_xref="HGNC:HGNC:28498"
CDS 121..741
/gene="C8orf46"
/gene_synonym="MGC33510"
/codon_start=1
/product="chromosome 8 open reading frame 46"
/protein_id="AAH28400.1"
/db_xref="GeneID:254778"
/db_xref="HGNC:HGNC:28498"
/translation="MHQIYSCSDENIEVFTTVIPSKVSSPARRRAKSSQHLLTKNVVI
ESDLYTHQPLELLPHRGDRRDPGDRRRFGRLQTARPPTAHPAKASARPVGISEPKTSN
LCGNRAYGKSLIPPVPRISVKTSASASLEATAMGTEKGAVLMRGSRHLKKMTEEYPAL
PQGAEASLPLTGSASCGVPGILRKMWTRHKKKSEYVGATNSAFEAD"
BASE COUNT 925 a 696 c 675 g 890 t
ORIGIN
1 gtcttttgtg gacccgcaca atgatccctg agccagactg gattaggatg cctcgcgact
61 aggggtccag agacagaggc ctccagttcc caggcacttc gggaagagga ggctgaaatg
121 atgcatcaga tttacagctg cagtgacgag aacatagaag ttttcaccac cgtgattcct
181 tccaaggtat ccagtccagc cagaagaaga gccaaaagct ctcagcacct cttgaccaag
241 aatgtggtga tcgagtcgga cctgtacacg caccagcccc tggagctgct gccccaccgc
301 ggagaccgca gggaccctgg cgaccgccgc aggtttgggc ggctccagac cgcgcggccg
361 cccacagccc acccggccaa agcctctgcc agacccgtgg ggatttctga acccaaaaca
421 tcaaatctgt gtgggaatcg agcatatgga aaatctctga taccgccagt gccccggatc
481 tcagtgaaaa cttcagcctc tgcctcattg gaggcgacag ccatgggcac agagaaggga
541 gctgttctga tgagaggatc cagacatctc aagaagatga ctgaagagta tccagccctt
601 ccccaaggag cagaagcctc tctaccactg acaggcagtg cttcctgcgg cgtccccggc
661 atcctccgga aaatgtggac aaggcacaag aagaagtctg aatatgtggg agccaccaac
721 agcgcctttg aggccgacta aaggtgaccc tcttcaagtg ccctgtgttg gccaaggttc
781 cccggacaag aggaaaaacc ttcaggattg aaactgagcc acacgcacct ctgctagtag
841 ctggtccaaa cccattatcc tccctcactc attgattacc ctgggatagg gcacaggaaa
901 gaaatgtccc tcgaaggcaa tataaaactg ccccttctta gaattgctaa agccattggt
961 ctgaaagtga ctttgggagg tcataaagtt tgtatctcta tctttaagca aaaaattaaa
1021 ctttcccagc tcattttaaa gacctccaag gaaggaaaaa agcaattcct ctgtcttcct
1081 tgtgagttgc tctaaagtgt gtgattttct agtgtaaatg gactttgagg cacttgtaaa
1141 cacaatggtt cttactgttt ccattactgc atttacttca ccttgacaag gtacaatttt
1201 caaggacaaa gcactatata taaagttagt agttctaata tccacttgag agtatactca
1261 agattgattt tcatggccat ttggcatgat tgcatgaatt ctctattctt ttatgtgcag
1321 tttttctata gaaaaacatt aaaagttaaa tgttgactgc taatgttttc tgaagtggca
1381 tagtctagtg gaatcaataa tcccttgctt tggtataata atttgaactt ttgaaagtgc
1441 tttctcatcc gttatctctt atcttcacaa aacccctgtg gaagaaagca caattattcc
1501 caatctgcag agggggaaat ggaggccttc agagattaca ggaccagata ccaggtagtg
1561 gaaccagaca gcaggtcctt aacttctctc cagtggactc cctgctttgc ctactctcta
1621 gcaactgact tggggaagtt tttaaatggt gagagtgtgt ctctgggggc aaccattgaa
1681 aagaagactc tgatatgttg gaacaagtaa gggatttgaa tgaaatacac tattatatct
1741 tatacgttag cttgaaccag aaaaagttga catttttgta ggtcaaaaac aattgagcat
1801 caatttcata tggttcaacc tcatatatga tactatgctt ttcttctatc agtgaaaatg
1861 tcatcatcaa ttccattgtc aacattagta gccttaaaac aataacataa taataatgat
1921 gataatgata cttatagcta tcatctatta aatgcctatg tttcaggcat gatactaggc
1981 aatttatata tatcatccta atctttctaa aaactctatt aggtggccct atccacttaa
2041 tagatgccaa ttcaaagagg tttaaatgat tagactaagg cacctaactt atgtgagtgt
2101 caggcttcaa tgcctgtgtt agagctactc cttcacacaa aatagttcag aacatagaga
2161 aggaccaagg ttaataaatg attttcatcc caaacactaa acatgattga tgggtagagg
2221 ctgcccgaag tactgtgtaa agatggaatc tgagatagaa gaatgctgtg gtcaattagt
2281 aattcttgcc catggaggga ttagtgacac atgccttgta tatttgtcat ctgtggccta
2341 aactctgccc ctgaaggttt gttttctaat tcagaggttt aaattaatct agcccactta
2401 ataaaaccag agatcctatg ggaaatttag cctaagacag tgctggaaat tgccatatgt
2461 tgatacaaag aagtgtttgg ccacattaca ggtctcagac tcaactgcta tgtgtgactg
2521 ccgctctgtg cctatgtctt gcttttttgc tgagttccct atttccatat ctccaggtga
2581 atccatgaga agcgagaggg tggctgagag gcctgggcct ctgggattcc accttgctat
2641 ctctgctctt caaccattgt tttagactct gaacaccaga tcctcatatc tgaaagtgat
2701 ttggagacct gggcatcaag tgctctttta agaaggggct atcccagagg actgttcaaa
2761 agtctcattc aatagagatg ttggagtcca gaacaaagtt agggagcaaa ccagtaacct
2821 atgctggtcg taacagagga tcctacaatt acgtttgttt ttaagacagg attttgctgt
2881 gttgcccaga ctggtctcaa actcctgggt tcaagagatc catcctccca cctcagtctc
2941 ctgaaagctg ggatgacagg cacatgccac cacacctagc tccttacaac catttatttt
3001 aacttatttc atttataact ggtatctttc atttgtatgt ggcagctaga gatttatata
3061 ggatggaagt aatttatttt taatttaaat atttcatgtt gaactgtttg ccttgtatgg
3121 aacattttac ttggccaatt caaataaaaa taaagtcagc tttgtttgtg aaaaaaaaaa
3181 aaaaaa
//