LOCUS BC028381 2882 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens BSD domain containing 1, mRNA (cDNA clone MGC:33015
IMAGE:4812029), complete cds.
ACCESSION BC028381
VERSION BC028381.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2882)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2882)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC028381.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255239.
FEATURES Location/Qualifiers
source 1..2882
/db_xref="H-InvDB:HIT000040544"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33015 IMAGE:4812029"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2882
/gene="BSDC1"
/gene_synonym="FLJ10276"
/gene_synonym="RP4-811H24.7"
/db_xref="GeneID:55108"
CDS 20..1312
/gene="BSDC1"
/gene_synonym="FLJ10276"
/gene_synonym="RP4-811H24.7"
/codon_start=1
/product="BSDC1 protein"
/protein_id="AAH28381.1"
/db_xref="GeneID:55108"
/translation="MAEGEDVGWWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQ
HDTACTIAATASVVKEKLATEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVI
TLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPDGPPELFDAWLSQFCLEEKKGEIS
ELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQRAEQSISEE
PGWEEEEEELMGISPISPKEAKVPVAKISTFPEGEPGPQSPCEENLVTSVEPPAEVTP
SESSESISLVTQIANPATAPEARVLPKDLSQKLLEASLEEQGLAVDVGETGPSPPIHS
KPLTPAGHTGGPEPRPPARVETLREEAPTDLRVFELNSDSGKSTPSNNGKKGSSTDIS
EDWEKDFDLDMTEEEVQMALSKVDASGELEDVEWEDWE"
BASE COUNT 742 a 766 c 750 g 624 t
ORIGIN
1 gtgatgtcat gcaggcaaga tggcggaagg ggaggacgtg ggatggtggc ggagctggct
61 gcagcagagc taccaagcag tcaaagagaa gtcctctgaa gccttggagt ttatgaagcg
121 ggacctgacg gagtttaccc aggtggtgca gcatgacacg gcctgtacca tcgcagccac
181 ggccagcgtg gtcaaggaga agctggctac ggaaggctcc tcaggagcaa cagagaagat
241 gaagaaaggg ttatctgact tcctaggggt gatctcagac acctttgccc cttcgccaga
301 caaaaccatc gactgcgatg tcatcaccct gatgggcaca ccgtctggca cagctgagcc
361 ctatgatggc accaaggctc gcctctatag cctgcagtcg gacccagcaa cctactgtaa
421 tgaaccagat gggcccccgg aattgtttga cgcctggctt tcccagttct gcttggagga
481 gaagaagggg gagatctcag agctccttgt aggcagcccc tccatccggg ccctctacac
541 caagatggtt ccagcagctg tttcccattc agaattctgg catcggtatt tctataaagt
601 ccatcagtta gagcaggagc aggcccggag ggacgccctg aagcagcggg cggaacagag
661 catctctgaa gagcccggct gggaggagga ggaagaggag ctcatgggca tttcacccat
721 atctccaaaa gaggcaaagg ttcctgtggc caaaatttct acattccctg aaggagaacc
781 tggcccccag agcccctgtg aagagaatct ggtgacttca gttgagcccc cagcagaggt
841 gactccatca gagagcagtg agagcatctc cctcgtgaca cagatcgcca acccggccac
901 tgcacctgag gcacgagtgc tacccaagga cctgtcccaa aagctgctag aggcatcctt
961 ggaggaacag ggcctggctg tggatgtggg tgagactgga ccctcacccc ctattcactc
1021 caagccccta acgcctgctg gccacaccgg cggcccagag cccaggcctc cagccagagt
1081 agagactctg agggaggagg cgcccacaga cttacgggtg tttgagctga actcggatag
1141 tgggaagtct acaccctcca acaatggaaa gaaaggctca agcacggaca tcagtgagga
1201 ctgggagaaa gactttgact tggacatgac tgaagaggag gtgcagatgg cactttccaa
1261 agtggatgcc tccggggagc tggaagatgt agagtgggag gactgggagt gagggagcca
1321 gagggagcag ctcccccacc catggcatct ctcgcctccc tcgctcgtct cagcccagcc
1381 ctggaagact gagaatgttc ccccaaatct cctctgccaa ccagagctct gggcacagat
1441 tctggtggct ccctgctggc cctcttgggc ctctgctcac acctgggaag gggctctcta
1501 aatcccggcc agaaactctg acttgtgcca acaataggat gacccaaggg agaggaaacc
1561 tatcctcctc accagaagag cctgtgtttt tctgctgaac acccactgtt cctgaggact
1621 cctgctggga agtcccaagg gatagttcta gcccttctgc ctgtgtagac agaagctaaa
1681 ccaccagtct ctctcggagg aagctgagac aacatactct gtccatacat aagcaggcag
1741 ggagggccat gccacctacc cttggctaaa cagggacagt gaacacattt tggttcctat
1801 cccagtgggt aagaggcact tatctctggg aaatttgcct ctcttgggac tctccccctc
1861 ccaggcattt tccattcctg gaaaggctcc tttggggttc agaatccaga gaccaaaccc
1921 tgacccacct ccttcctttc ctccagccca cactggtctg tccccatgcc ttcccagggc
1981 ttcttcatgt cagatgcacc caagtcctta gcccagctgt gccacctgca ggagttcgct
2041 cttgcgtttc ttcccctccc caagaaggga gggggctact tcaggccctt ctgtgtgttg
2101 cctggcagga taccttgtcc aaccagctac ccacctcaac tcccctgtag tttaggacac
2161 aaaacagcta ccagcggtac agagcggtga tcaaagccga gtacttacaa ctctggtaag
2221 cctagcttct ccgcctcagc ccttctgctt ctggaagggc tatcctgggg gtgaacttga
2281 aactctcatc aggcttctgc aaaagctctt cttcctgaag acagacccag cctttgtgct
2341 ctcaccctcc actctggtaa agctgcacct ctgggggaat gaggggctgc aggaatctct
2401 ggagagcctg gtgcttcacg atgctgctct ggtgattctt gtacctaatc tggtgtgctc
2461 accaatgagt gaaagggatc gtgggtcagg gacaccgaga gagtgaggtc acttccactt
2521 caaaccttca gtgagggggt gggatggaga gaatgctgaa tctttttttt gacgggatgg
2581 ggtttttctc tttgtaatta tttctttagt ttaattaacc ttttggttgt ttgtgcaata
2641 ttatatattt taaattataa tgcatctccc cagagtattt tgtagctggg aaaagaaaaa
2701 aggaaaaaaa gaaaaaaaga ttctaacagc tgttagtttt ataattaaaa aagaaagaaa
2761 aaagaacttt gtcctgaacc ttttacagac ttgccgttaa cagcattaaa gtgattcacc
2821 cgaagctgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa
2881 aa
//