LOCUS BC028379 2853 bp mRNA linear HUM 27-JUL-2005
DEFINITION Homo sapiens synaptotagmin III, mRNA (cDNA clone MGC:32928
IMAGE:4819777), complete cds.
ACCESSION BC028379
VERSION BC028379.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2853)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2853)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150053.
FEATURES Location/Qualifiers
source 1..2853
/db_xref="H-InvDB:HIT000050946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32928 IMAGE:4819777"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2853
/gene="SYT3"
/gene_synonym="DKFZp761O132"
/gene_synonym="SytIII"
/db_xref="GeneID:84258"
/db_xref="MIM:600327"
CDS 560..2332
/gene="SYT3"
/gene_synonym="DKFZp761O132"
/gene_synonym="SytIII"
/codon_start=1
/product="SYT3 protein"
/protein_id="AAH28379.1"
/db_xref="GeneID:84258"
/db_xref="MIM:600327"
/translation="MSGDYEDDLCRRALILVSDLCARVRDADTNDRCQEFNDRIRGYP
RGPDADISVSLLSVIVTFCGIVLLGVSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLGP
GVGLAGLVGGGGHHLAAGLGGHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPS
YLDMDSYPEAAAAAVAAGVKPSQTSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVT
SLAPTTRYPALPRPLTQQTLTSQPDPSSEERPPALPLPLPGGEEKAKLIGQIKPELYQ
GTGPGGRRSGGGPGSGEAGTGAPCGRISFALRYLYGSDQLVVRILQAMDLPAKDSNGF
SDPYVKIYLLPDRKKKFQTKVHRKTLNPVFNETFQFSVPLAELAQRKLHFSVYDFDRF
SRHDLIGQVVLDNLLELAEQPPDRPLWRDIVEGGSEKADLGELNFSLCYLPTAGRLTV
TIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAP
ESVENVGLSIAVVDYDCIGHNEVIGVCRVGPDAADPHGREHWAEMLANPRKPVEHWHQ
LVEEKTVTSFTKGSKGLSEKENSE"
BASE COUNT 519 a 996 c 762 g 576 t
ORIGIN
1 agcgggctgc ggcggcggcg gcggcggcag cggcggctcc ggcccctaga tcagacattc
61 tctctcatta cccggcgcgt gggaacgggt ccacagcccc ttgtccgccc tagaaccccc
121 atgggctgcc gcccgccgcc gcctcggctg ccacccagga cacggcagag ataagcgcag
181 ccccttcact gcccttctcc atctcttcct ccttgttcat ttgtccctgt tctctgtcct
241 ctactccact catgcccatc tctgtcccct tgacttaccc agtccctgct actatctcca
301 tccctaattt ctgccctctt gtctgtctac tcctaattcc ttttccttgt ccatccctaa
361 tacctgtcac cttgtccttc ttcctcgaat ctccatccct aatccatctg cccctaatct
421 ctgtcccctt tgcccatcct tccttttctc ggtgtctctt tccaccctta tctccacacc
481 tgcccaccct gcactcccat tctgtttccc atctgcaccc ttgccccatc cctcccacac
541 acaggaccag acggccacca tgtcaggaga ctacgaggat gacctctgcc ggcgggcact
601 catcctggtc tcggacctct gtgcgcgggt ccgagatgct gacaccaacg acaggtgcca
661 ggagttcaat gaccgaatcc gaggctatcc ccggggtcca gatgcagaca tctccgtgag
721 cctgctgtcg gtcatcgtga cattctgtgg cattgtcctt ctgggtgtct ctctcttcgt
781 gtcctggaag ttgtgctggg tgccctggcg ggacaaggga ggctcggcag tgggcggtgg
841 ccccctgcgc aaagacctag gccctggtgt cgggctggca ggcctggtag gcggaggcgg
901 gcaccacctg gcggctggcc tgggtggcca tcctctgctg ggcggcccac accaccatgc
961 ccatgccgcc caccatccac cctttgctga gctgctggag ccaggcagcc tggggggttc
1021 tgacacccct gagccctcct acttggacat ggactcgtat ccagaggctg cagcagcagc
1081 agtggccgct ggggtcaaac cgagccaaac atcccctgag ctgccctctg aggggggagc
1141 aggctctggg ttgctcctgc tgccccccag tggtgggggc ttgcccagtg cccagtcaca
1201 tcagcaggtc acaagcctgg cacccactac caggtaccca gccctgcccc gacccctcac
1261 ccagcagact ctgacctccc agccggaccc cagcagtgag gagcgcccac ctgccctgcc
1321 cttacccctg cctggaggcg aggaaaaagc caaactcatt gggcagatta agccagagct
1381 gtaccagggg actggccctg gtggccggcg gagcggtggg ggcccaggct ctggagaggc
1441 aggcacaggg gcaccctgtg gccgtatcag cttcgccctg cggtacctct atggctcgga
1501 ccagctggtg gtgaggatcc tgcaggccat ggacctccct gccaaggact ccaacggctt
1561 ctcagacccc tacgtcaaga tctacctgct gcctgaccgc aagaaaaagt ttcagaccaa
1621 ggtgcacagg aagaccctga accccgtctt caatgagacg tttcaattct cggtgcccct
1681 ggccgagctg gcccaacgca aactgcactt cagcgtctat gactttgacc gcttctcgcg
1741 gcacgacctc atcggccagg tggtgctgga caacctcctg gagctggccg agcagccccc
1801 tgaccgcccg ctctggaggg acatcgtgga gggcggctcg gaaaaagcag atcttgggga
1861 gctcaacttc tcactctgct acctccccac ggccgggcgc ctcaccgtga ccatcatcaa
1921 agcctctaac ctcaaagcga tggacctcac tggcttctca gacccctacg tgaaggcctc
1981 cctgatcagc gaggggcggc gtctgaagaa gcggaaaacc tccatcaaga agaacacgct
2041 gaaccccacc tataatgagg cgctggtgtt cgacgtggcc cccgagagcg tggagaacgt
2101 ggggctcagc atcgccgtgg tggactacga ctgcatcggg cacaacgagg tgatcggcgt
2161 gtgccgtgtg ggccccgacg ctgccgaccc gcacggccgc gagcactggg cagagatgct
2221 ggccaatccc cgcaagcccg tggagcactg gcatcagcta gtggaggaaa agactgtgac
2281 cagcttcaca aaaggcagca aaggactatc agagaaagag aactccgagt gaggggtctg
2341 gcctaggccc gggatcggac caggctccct caggacccca tcctttcctg cccggaccgt
2401 gaattcatct ccttgaagcc ataacgtccg agctgctggt gcggggcagc cctggcccta
2461 ggcttcctaa ccctggaagc gagaggatga gaggaggccg gcccagctcc ttctttcagg
2521 gtgggggtca ttcagcctcc actgtgtctg tcttttcttc cctggggctc cccctcgagg
2581 cgaggggcca tgcatgtctg ggggacccct gccccccaaa accctctgtc tgtctctgtc
2641 tctttgctgt ttgtccaaga ctcagtgtcc cgacccttgt tctcgccgtg aatgtcaatg
2701 ggccaatcct ctctgtcctt tcagacacac acacacctgt gtccacccct tctgttcgcc
2761 acaccctgcg tctggccggt ccccacactg ctgctgctat caacgccaga ataaacacac
2821 tctgtgggtc tcactccaaa aaaaaaaaaa aaa
//