LOCUS BC028357 2392 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens calmegin, mRNA (cDNA clone MGC:26321 IMAGE:4830135),
complete cds.
ACCESSION BC028357
VERSION BC028357.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2392)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028357.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758003.
FEATURES Location/Qualifiers
source 1..2392
/db_xref="H-InvDB:HIT000040533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26321 IMAGE:4830135"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2392
/gene="CLGN"
/db_xref="GeneID:1047"
/db_xref="HGNC:HGNC:2060"
/db_xref="MIM:601858"
CDS 89..1921
/gene="CLGN"
/codon_start=1
/product="calmegin"
/protein_id="AAH28357.1"
/db_xref="GeneID:1047"
/db_xref="HGNC:HGNC:2060"
/db_xref="MIM:601858"
/translation="MHFQAFWLCLGLLFISINAEFMDDDVETEDFEENSEEIDVNESE
LSSEIKYKTPQPIGEVYFAETFDSGRLAGWVLSKAKKDDMDEEISIYDGRWEIEELKE
NQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLA
DTDDLILENFYDKTSYIIMFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLK
KFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLEDVVPPIKPPKEIEDPNDKKPE
EWDERAKIPDPSAVKPEDWDESEPAQIEDSSVVKPAGWLDDEPKFIPDPNAEKPDDWN
EDTDGEWEAPQILNPACRIGCGEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIP
NPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEKEVADHWAADGWRWKIMI
ANANKPGVLKQLMAAAEGHPWLWLIYLVTAGVPIALITSFCWPRKVKKKHKDTEYKKT
DICIPQTKGVLEQEEKEEKAALEKPMDLEEEKKQNDGEMLEKEEESEPEEKSEEEIEI
IEGQEESNQSNKSGSEDEMKEADESTGSGDGPIKSVRKRRVRKD"
BASE COUNT 863 a 372 c 518 g 639 t
ORIGIN
1 ggtctgaaga gacgcgggga ccaagtggca acgacttgga catctgagct gtcactgccg
61 aaaacaggcc gcaagagaga taatcaatat gcatttccaa gccttttggc tatgtttggg
121 tcttctgttc atctcaatta atgcagaatt tatggatgat gatgttgaga cggaagactt
181 tgaagaaaat tcagaagaaa ttgatgttaa tgaaagtgaa ctttcctcag agattaaata
241 taagacacct caacctatag gagaagtata ttttgcagaa acttttgata gtggaaggtt
301 ggctggatgg gtcttatcaa aagcaaagaa agatgacatg gatgaggaaa tttcaatata
361 cgatggaaga tgggaaattg aagagttgaa agaaaaccag gtacctggtg acagaggact
421 ggtattaaaa tctagagcaa agcatcatgc aatatctgct gtattagcaa aaccattcat
481 ttttgctgat aaacccttga tagttcaata tgaagtaaat tttcaagatg gtattgattg
541 tggaggtgca tacattaaac tcctagcaga cactgatgat ttgattctgg aaaactttta
601 tgataaaaca tcctatatca ttatgtttgg accagataaa tgtggagaag attataaact
661 tcattttatc ttcagacata aacatcccaa aactggagtt ttcgaagaga aacatgccaa
721 acctccagat gtagacctta aaaagttctt tacagacagg aagactcatc tttataccct
781 tgtgatgaat ccagatgaca catttgaggt gttagttgat caaacagttg taaacaaagg
841 aagcctccta gaggatgtgg ttcctcctat caaacctccc aaagaaattg aagatcccaa
901 tgataaaaaa cctgaggaat gggatgaaag agcaaaaatt cctgatcctt ctgccgtcaa
961 accagaagac tgggatgaaa gtgaacctgc ccaaatagaa gattcaagtg ttgttaaacc
1021 tgctggctgg cttgatgatg aaccaaaatt tatccctgat cctaatgctg aaaaacctga
1081 tgactggaat gaagacacgg atggagaatg ggaggcacct cagattctta atccagcatg
1141 tcggattggg tgtggtgagt ggaaacctcc catgatagat aacccaaaat acaaaggagt
1201 atggagacct ccactggtcg ataatcctaa ctatcaggga atctggagtc ctcgaaaaat
1261 tcctaatcca gattatttcg aagatgatca tccatttctt ctgacttctt tcagtgctct
1321 tggtttagag ctttggtcta tgacctctga tatctacttt gataatttta ttatctgttc
1381 ggaaaaggaa gtagcagatc actgggctgc agatggttgg agatggaaaa taatgatagc
1441 aaatgctaat aagcctggtg tattaaaaca gttaatggca gctgctgaag ggcacccatg
1501 gctttggttg atttatcttg tgacagcagg agtgccaata gcattaatta cttcattttg
1561 ttggccaaga aaagtaaaga aaaaacataa agatacagag tataaaaaaa ccgacatatg
1621 tataccacaa acaaaaggag tactagagca agaagaaaag gaagagaaag cagccctgga
1681 aaaaccaatg gacctggaag aggaaaaaaa gcaaaatgat ggtgaaatgc ttgaaaaaga
1741 agaggaaagt gaacctgagg aaaagagtga agaagaaatt gaaatcatag aagggcaaga
1801 agaaagtaat caatcaaata agtctgggtc agaggatgag atgaaagaag cagatgagag
1861 cacaggatct ggagatgggc cgataaagtc agtacgcaaa agaagagtac gaaaggacta
1921 aactagattg aaatattttt aattcccgag agggatgttt ggcattgtaa aaatcagcat
1981 gccagacctg aactttaatc agtctgcaca tcctgtttct aatatctagc aacattatat
2041 tctttcagac atttatttta gtccttcatt tcagaggaaa aagaagcaac tttgaagtta
2101 cctcatcttt gaatttagaa taaaagtggc acattacata tcggatctaa gagattaata
2161 ccattagaag ttacacagtt ttagttgttt ggagatagtt ttggtttgta cagaacaaaa
2221 taatatgtag cagcttcatt gctattggaa aaatcagtta ttggaatttc cacttaaatg
2281 gctatacaac aatataactg gtagttctat aataaaaatg agcatatgtt ctgttgtgaa
2341 gagctaaatg caataaagtt tctgtatggt tgtttgaaaa aaaaaaaaaa aa
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