LOCUS BC028316 1017 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens tumor suppressor candidate 1, mRNA (cDNA clone
IMAGE:5190302), partial cds.
ACCESSION BC028316
VERSION BC028316.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1017)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1017)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1017
/db_xref="H-InvDB:HIT000091565"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5190302"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1017
/gene="TUSC1"
/gene_synonym="TSG-9"
/db_xref="GeneID:286319"
CDS <1..275
/gene="TUSC1"
/gene_synonym="TSG-9"
/codon_start=3
/product="TUSC1 protein"
/protein_id="AAH28316.1"
/db_xref="GeneID:286319"
/translation="DGTPAEARRVPEEASTNRRARDSGREDEPGSPRALRARLEKLEA
MYRRALLQLHLEQRGPRPSGDKEEQPLQEPDSGLRSRDSEPSGPWL"
BASE COUNT 230 a 282 c 267 g 238 t
ORIGIN
1 gcgacgggac gcccgcggag gcacgccggg tccctgaaga ggccagcacg aaccggaggg
61 ctagagacag cggccgagag gacgagccgg gcagccccag ggccctgagg gcccgacttg
121 agaagctgga agccatgtac cgccgggccc tgctgcagct gcacctcgag cagcggggac
181 cacgtccgag cggggacaag gaggagcagc ctctacagga acccgactcc ggcctccgct
241 cccgggactc ggagccctct gggccctggc tgtagccgag gccgcagccg gtgagaggcg
301 gagcctcgag cgggcccctc ctcctccgtt cccagctacc cccgacctcg cgcacgccct
361 ggcccgctcc ctgcccgcgg ataccttgga ctacggtgcc ttcccgcccc caccagtgga
421 cacttccggg tggcgcttgg ccatccgctt ggtggaggtc gagtgggtgc aagggccctc
481 aggacctccc acatgtacag ttcccctgcc tcttgccccg gctagtttcc ctggagagag
541 gcctagccaa caacgaaggg acggatttta aaacagcgag aactgggtgc caagaaacac
601 ttcatagtcc ctgaactttt ctggatgttg tgcgaacctg ttgtattttt ttttttcctg
661 tattttggtt ctgagggatg agtaatgtgt ttttagttcg ttgagtttat ccattcttca
721 atcccctaaa gccttcagct gttctttcat atgtggccaa cattttaagt acagtgtttg
781 cttttataag tcggtgttac ttggatgtcc tataaaatac ccacttttta taaagatgat
841 atttataacc taggaactca tgcctgtctt ggctgcagtc cctgtacatc taatatatac
901 tgatttgttt gcccccagag aatttttaag gtatctgcct atatcgtgat cttttgaaat
961 ggtaaataaa tctggtgcat taaaaattaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//