LOCUS BC028240 2168 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens chromosome 11 open reading frame 80, mRNA (cDNA clone
MGC:39886 IMAGE:5243907), complete cds.
ACCESSION BC028240
VERSION BC028240.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2168)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2168)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: n Column: 18.
FEATURES Location/Qualifiers
source 1..2168
/db_xref="H-InvDB:HIT000040507"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39886 IMAGE:5243907"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2168
/gene="C11orf80"
/db_xref="GeneID:79703"
/db_xref="HGNC:HGNC:26197"
CDS 476..2044
/gene="C11orf80"
/codon_start=1
/product="chromosome 11 open reading frame 80"
/protein_id="AAH28240.1"
/db_xref="GeneID:79703"
/db_xref="HGNC:HGNC:26197"
/translation="MVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGSYSQD
MTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIF
GVENEPTLNLGNGIALLVDSQHYVRPNFGTIESHCSRIHPVLGHPVMLFIPEDVAGMD
LLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDT
SSLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFV
DFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQ
KLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQHQFL
HHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRA
LRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQE
VSNLSEWLSPSPGP"
BASE COUNT 541 a 558 c 578 g 491 t
ORIGIN
1 ggaagggatg ggctcgcgct gccgggcgtg ggcgtggact cgggcgtggg cactggcgga
61 gttccaagcc cgggctgagg agggggcggc ggcggcggcg gcggcggcgg cgggcgggta
121 cccttcgact gggcgttgcc gctgttccct gcgcggcatg gaggggacgg ccgtggccgt
181 gttcgagatt ttgagatttt taataattca ctggaagtgt gacatagatg tatcaaaggg
241 agcattgcta gaagggcagc tagtgatttc catagaagga ttaaattcta agcaccaggc
301 aaatgctctt cattgtgtaa caactagatg gagtctcact ctgttaccca ggccggagtg
361 cagtggcgca gtctcggctc actgcaacct ccacctccca ggttcaagtg attctcatgc
421 ctcagtcccc cgagtagctg ggattacaga tgcccaccac catgcctggc taattatggt
481 tgcttctgca ggaagccttt ttggtggcat ggtcctcaag aagttcctaa aagaaataca
541 gtccatactg cccggaatct ctgcaaagct gacttggact tcagaggaag gcagctattc
601 tcaggatatg acaggggtaa cacccttcca gatgattttt gaggttgatg aaaagcccag
661 aaccttgatg acagattgtc tggttataaa gcatttttta cgtaaaatca tcatggtgca
721 ccctaaggtc agatttcatt tcagtgtaaa ggtaaatgga atcctctcca cagagatctt
781 tggggtggag aatgaaccca ctttgaacct tgggaatgga attgctcttt tggtcgactc
841 ccagcattat gtgagaccaa attttggtac aattgaatca cactgcagca gaattcaccc
901 tgtgctagga catccagtaa tgcttttcat ccctgaagac gtggctggca tggacttgtt
961 gggagaactg atactgactc cagcagctgc actgtgcccc agcccaaagg tttcttccaa
1021 ccagcttaac aggatttctt cagtttccat atttctatat ggacctttgg gtctgcctct
1081 gatattgtca acttgggagc agccgatgac tactttcttc aaagatacct cttctttagt
1141 tgactggaaa aaataccatt tgtgtatgat acccaatttg gatctcaatt tggatagaga
1201 tttggtgctt ccagatgtga gttatcaggt ggaatccagt gaggaggatc agtctcagac
1261 tatggatcct caaggacaaa ctctgctgct ttttctcttt gtggatttcc acagtgcatt
1321 tccagtccag caaatggaaa tctggggagt ctatactttg ctcacaactc atctcaatgc
1381 catccttgtg gagagccaca gtgtagtgca aggttccatc caattcactg tggacaaggt
1441 cttggagcaa catcaccagg ctgccaaggc tcagcagaaa ctacaggcct cactctcagt
1501 ggctgtgaac tccatcatga gtattctgac tggaagcact aggagcagct tccgaaagat
1561 gtgtctccag acccttcaag cagctgacac acaagagttc aggaccaaac tgcacaaagt
1621 atttcgtgag atcacccaac accaatttct tcaccactgc tcatgtgagg tgaagcagca
1681 gctaacccta gaaaaaaagg actcagccca gggcactgag gacgcacctg ataacagcag
1741 cctggagctc ctagcagata ccagcgggca agcagaaaac aagaggctca agaggggcag
1801 cccccgcata gaggagatgc gagctctgcg ctctgccagg gccccgagcc cgtcagaggc
1861 cgccccgcgc cgcccggaag ccaccgcggc ccccctcact cctagaggaa gggagcaccg
1921 cgaggctcac ggcagggccc tggcgccggg cagggcgagc ctcggaagcc gcctggagga
1981 cgtgctgtgg ctgcaggagg tctccaacct gtcagagtgg ctgagtccca gccctgggcc
2041 ctgagccggg tccccttccg caagcgccca ccgatccgga ggctgcgggc agccgttatc
2101 ccgtggttta ataaagctgc cgcgcgctca ccaagtccaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaa
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