LOCUS BC028228 1909 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens hypothetical protein FLJ40125, mRNA (cDNA clone MGC:40208 IMAGE:5240955), complete cds. ACCESSION BC028228 VERSION BC028228.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1909) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1909) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: l Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31341935 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..1909 /db_xref="H-InvDB:HIT000259003" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40208 IMAGE:5240955" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1909 /gene="FLJ40125" /db_xref="GeneID:147699" CDS 10..1032 /gene="FLJ40125" /codon_start=1 /product="FLJ40125 protein" /protein_id="AAH28228.1" /db_xref="GeneID:147699" /translation="MEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHV LQELGPEPSEPEGVREALRRAFLSADERLRSLWPRVETGGCTAVVLLVSPRFLYLAHC GDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTY KEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLG LAPELLCAQLLDTCLCKVLGAWRGTFGAWCSRGREPRGFGEEGFDREARVKLAKEGIG LKRRAWPEVGRAKIQGRSLRDALRHGRVSGRDLRERAWSFGKGRFWVVGAGPEVLISA GRWKSR" BASE COUNT 430 a 500 c 619 g 360 t ORIGIN 1 cgcgcgcgca tggaggatgc tcactgcact tggctttcgt tacctggtct gcccccgggc 61 tgggccttgt ttgccgtcct cgacggccac ggtggggctc gagctgcccg cttcggtgca 121 cgccatttgc caggccatgt gctccaggag ctgggcccgg agcctagcga gcccgagggc 181 gtgcgcgagg cgctgcgccg agccttcttg agcgccgacg agcgcctgcg ctccctctgg 241 ccccgcgtgg aaacgggcgg ctgcacggcc gtggtgttgc tggtctcccc gcggtttctg 301 tacctggcgc actgcggtga ctcccgcgcg gtgctgagcc gcgctggcgc cgtggccttc 361 agcacagagg accaccggcc ccttcgaccc cgggaacgcg agcgcatcca cgccgctggc 421 ggcaccatcc gccgccgccg cgtcgagggc tctctggccg tgtcgcgagc gttgggcgac 481 tttacctaca aggaggctcc ggggaggccc cccgagctac agctcgtttc tgcggagcca 541 gaggtggccg cactggcacg ccaggctgag gacgagttca tgctcctggc ctctgatggc 601 gtctgggaca ctgtgtctgg tgctgccctg gcgggactgg tggcttcacg cctccgcttg 661 ggcctggccc cagagcttct ctgcgcgcag ctgttggaca cgtgtctgtg caaggtcctg 721 ggggcgtggc gtggtacctt tggggcttgg tgcagcagag ggagagagcc tcggggtttt 781 ggggaggagg gctttgatag agaggcaaga gtaaagctag caaaggaggg gataggactc 841 aagcgaaggg cgtggcctga agtgggcagg gccaaaatac aggggcggag cctgagggat 901 gctttgaggc acgggagagt tagtggaagg gacttaagag aaagggcgtg gtcttttgga 961 aaggggcgat tctgggtcgt aggagccggg ccggaagtat tgattagtgc tggaaggtgg 1021 aagagcaggt aaacatcaga gcgggcggag ctttagggaa aaggcattgt tctctcaatt 1081 gggagcgcct aggaccgggt ttggtcccag taagagagga ttggcaggtg ggtgggacgc 1141 gaaagaaatg ggcataagta gaatgaagtg ggggacttga acctggggat tgttgggaag 1201 ctctgccttg gactctcccc caccgggctc ctttttctcc accggcttca gggcagcctg 1261 gacaacatga cctgcatcct ggtctgcttc cctggggccc ctaggccttc tgaggaggcg 1321 atcaggaggg agctagcact ggacgcagcc ctgggctgca gaatcgctga actgtgtgcc 1381 tctgctcaga agccccccag cctgaacaca gttttcagga ctctggcctc agaggacatc 1441 ccagatttac ctcctggggg agggctggac tgcaaggcca ctgtcattgc tgaagtttat 1501 tctcagatct gccaggtctc agaagagtgc ggagagaagg ggcaggatgg ggctgggaag 1561 tccaacccca cgcatttggg ctcagccttg gacatggagg cctgacagct gttgtccttt 1621 ggggatcctt tgcttctctg gggcctcaac agaactaaag aagaaaaccg accctttccc 1681 caactacatg taccagcgga aggaaggaag gccaatgtag gaacccaaaa tgcttatttc 1741 ttcttctctt acttccctct cacagaaaag tcttacgaat ggggaaattc caccaacatc 1801 cagaccaaaa agaaaaaagc ccaaatcgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //