LOCUS BC028205 4015 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:5200275, with apparent retained
intron.
ACCESSION BC028205
VERSION BC028205.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4015)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4015)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4015
/db_xref="H-InvDB:HIT000091542"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5200275"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 794 a 1270 c 1241 g 710 t
ORIGIN
1 cccggagagg tggctccttc gccctgaagc cttcctcggc cccctacgca ctcgggcccc
61 ttccgcagag gattcgcagc gtgagcgccc cgcagcccgc tcaggaccag ctatgagcag
121 acgtgtggtt cggcaaagca agttccgcca tgtgtttggg caggcagcaa aggccgacca
181 ggcctacgag gacatccgtg tgtccaaggt cacatgggac agctccttct gtgccgtcaa
241 ccccaaattc ctggccatta ttgtggaggc tggaggcggg ggtgccttca tcgtcctgcc
301 tctggccaag ggcgagtgga taagaactac ccactggtca ctgggcacac tgcccctgtg
361 ctggatattg actggtgtcc acacaatgac aacgttatcg ccagtgcctc agacgacacc
421 accatcatgg tgtggcagat tccagactat acccccatgc gcaacattac ggaacctatc
481 atcacacttg agggccactc caagcgtgtg ggcatcctct cctggcaccc tactgccagg
541 aatgtcctgc tcagtgcagg tggtgacaat gtgatcatca tctggaatgt gggcaccggg
601 gaggtgctgc tgagcctgga tgatatgcac ccagacgtca tccacagtgt gtgctggaac
661 agcaacggta gcctgctagc caccacctgc aaggacaaga ccttgcgcat cattgacccc
721 agaaaaggcc aagtggtggc ggtctctgcc ctaagtaagc ccccagcctg caattctctg
781 cccggctcct gttccctccc ctcccttgca tctcagaagc tcagagaagg gctcctcgct
841 ttgggattga ggaggggaga agctggaaac tccatcctcc caccagaacc tgcatgaaac
901 ctgagctcct ggacccctct cctctcagcc ggcacccaga cgcatcttcc agggtctggg
961 gcctgacact ggctcgaggg ctggcccttt ctccttgtgg acccgctggg cgggggatgg
1021 ggcaaccctc gcgcgttgct tatcccagcc ggatcccctg ggagggcggc ggccctggcc
1081 tcgccagcct caagtctaac ctggggtgcg ggtgcgtggg ccgcgtgcat gtctgcgtgg
1141 agcaagcgcg ccgagagcgg tcggggctgg cgccggggcg ctctaaccca ctaacccggc
1201 gagcaggagc aagcccggcc tcacgagggc gcccgcccgc tgcgggctgt cttcaccgca
1261 gacgggaagc tgctcagcac cggcttcagc aggatgagtg agcggcaact cgcgctctgg
1321 gacccggtag gccaggccgc gccgggcgcg ctagctcgct ccttctctgg gtctgccggg
1381 agcgccttcc cgggctgtgg ctggcgccca agaggccaga gcggagcggg gagctcccat
1441 tcgggaaaag cctcgctgcg actccgggga gccagcagac acccctgctc tagggatcgg
1501 cctttgagcg cgcttaaggg ttcgggatcg gctgagagcc gcgtgcctcc tgctctctcc
1561 aggcccggat gctctccagg tcaggggcca gacgtggccc cgcaggaagc tgagtgctta
1621 ggccccattt gtctcttccc cgcatccgct cctccacccc ggacacccaa gtcagcaagc
1681 tggttgctca tccctccatg ctcctcaggg caggcagctg ggtgatgtcc ctccctgtct
1741 ccccctcccc ccaggagagg tttgcggccc acgaggggat gaggcccatg cgggccgtct
1801 tcacgcgcca gggccatatc ttcaccacgg gcttcacccg catgagccag cgagagctgg
1861 gcctgtggga cccggtaacg cagctggagg cttggggtgt gtgcctcggg gactggcatc
1921 acgggagagt ggccaggcgc cccccacccg cagggcatgc ccacctggac aggactgaag
1981 gctgctgcca cctctgcagc gcctgccatt ctcacaccca cccctctgcc cagttttgct
2041 gcgtcgcgtg aaggatcctg cgctggcgcc cccacctggt gatgccgagt ccctgggggt
2101 ggtttgctgt gactgcatgc ggcgcgcagc gggtatatgt gcaggggagg aggagctatg
2161 tgcgcagggg aggaggagag atgtgcccag gggaggggcc tgcaactctg gtcactagag
2221 gtttggggca tagggtttgg gaaggccagg aagcgtaaag gggcttctgg gggtcccgaa
2281 gtagcacggg agggtggggc agggctggtc acgcctcctg tgctcgggca gaacaacttc
2341 gaggagccag tggcactgca ggagatggac acaagcaacg gggtcctatt gcccttttac
2401 gatcccgact ccagcatcgt ctacctgtgt ggcaagggcg acagcagcat tcggtacttt
2461 gagattaccg acgagccgcc tttcgtgcac tacctgaaca cgttcagcag caaagagccg
2521 cagcggggca tgggtttcat gcccaaaagg ggactggatg tcagcaagtg tgagatcgcc
2581 cggttctaca agctacacga aagaaagtgt gaacctatca tcatgactgt gccccgcaag
2641 tcagacctct tccaggacga tctgtacccg gatacgccag gcccggagcc ggccctagaa
2701 gcggacgaat ggctatccgg ccaggacgcc gaacccgtgc tcatttcgct gagggacggc
2761 tatgtgcccc ccaagcaccg cgagctccgg gtcacgaagc gcaacatcct ggacgtgcgc
2821 ccgccctccg gcccccgccg cagccagtcg gccagcgacg cccccttgtc gcagcacacc
2881 ctggagacgc tgctggaaga gatcaaggcc ctccgcgagc gggtgcaggc ccaggagcag
2941 cgcatcacgg ctctggagaa catgctgtgc gagctggtgg acggcacgga ctagccccgc
3001 gcgccaggca ggcggagcgg ggcggggcgc acaagctcgg ccccgccccg gcttttagtc
3061 ccgaactccg gaccccgcct tcttgggctg ggcccggggg cgggactggg gagggaactc
3121 cgcccctcgc gggagaccag aactcttgga gcttagggga gacccacgtc gctccagcgg
3181 aggctggact gcgagcctcg tctgggactc ggctggagct ggcctaggga ggcctggggt
3241 aacctggggg gctcagcaat ggtgctgcac ggcgaggtgg tgtccccctt tgtcctccgc
3301 ccagggcagg gaaagtgctt agtattagcg tgatgcttgg ggttattgga gcctgagctt
3361 gacctcaaac gggtggcgat ttgatgggta cccccaggct ggggaaaatg acagcgcttc
3421 tcctaatcag ctcactggat tccatcaccc tgagcggtaa accagatggg cgtcacccca
3481 gttctgcaga cacatacaca acccgtttgc tgcagagccg gacccagtgg ctacacccac
3541 agcggtctgt ggtagagaac tctcttcctt ctttccaccg acaggggcga gggctgcttc
3601 ctcgcggcag cccccgcgaa gaaatctcga gagaactggc atgaggagtt aggttcatca
3661 caaatacaca cacactgccc ccaaccctct gccgttgcct ctctcagaaa aacaagacgt
3721 actgaatgaa atattttact aagcgttcag tctgtgcctc ctgcatgggt gggagtgagg
3781 ggaacgagac ccccagcctc tgcaaatgct acccccaggc tcctgggaga cctggcgatg
3841 cactcctggg ctcagggtcc atcaggcagc ctcttaccct agagctctct ccactctgag
3901 gttcagaagg accccaaccc acaccgtagg cgttcccccc aagtaaagtt aggtagcaaa
3961 agcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//