LOCUS BC028191 1227 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens forkhead box R1, mRNA (cDNA clone MGC:40176 IMAGE:5167039), complete cds. ACCESSION BC028191 VERSION BC028191.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1227) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1227) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: d Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 61743928. FEATURES Location/Qualifiers source 1..1227 /db_xref="H-InvDB:HIT000091534" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40176 IMAGE:5167039" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1227 /gene="FOXR1" /gene_synonym="DLNB13" /gene_synonym="FOXN5" /db_xref="GeneID:283150" /db_xref="HGNC:HGNC:29980" CDS 225..1103 /gene="FOXR1" /gene_synonym="DLNB13" /gene_synonym="FOXN5" /codon_start=1 /product="forkhead box R1" /protein_id="AAH28191.2" /db_xref="GeneID:283150" /db_xref="HGNC:HGNC:29980" /translation="MGNELFLAFTTSHLPLAEQKLARYKLRIVKPPKLPLEKKPNPDK DGPDYEPNLWMWVNPNIVYPPGKLEVSGRRKREDLTSTLPSSQPPQKEEDASCSEAAG VESLSQSSSKRSPPRKRFAFSPSTWELTEEEEAEDQEDSSSMALPSPHKRAPLQSRRL RQASSQAGRLWSRPPLNYFHLIALALRNSSPCGLNVQQIYSFTRKHFPFFRTAPEGWK NTVRHNLCFRDSFEKVPVSMQGGASTRPRSCLWKLTEEGHRRFAEEARALASTRLESI QQCMSQPDVMPFLFDL" BASE COUNT 335 a 380 c 293 g 219 t ORIGIN 1 aatggaccgc tccacacctg agctgccgcc aagctaactc aatccgagcc ggcgcatttg 61 agaaggcgcc tgtgagggtc gctcctcagc cgccgcgctc ccactccgcg tccccactcc 121 gcgccgccgc gcctctgcca gccccgaagg tggacgtgaa gctccaacac ctcgacttct 181 gggcccgcct ccatggccag gtcccgggac tgctggactg ggacatgggg aacgagctct 241 ttctggcctt caccacatct cacctcccct tagcggagca gaaacttgcc aggtataaac 301 tccgaattgt taagccacca aaattacccc tagagaaaaa acccaaccct gataaggatg 361 gtccagatta tgagcccaac ctctggatgt gggtaaatcc caacattgtg tatccccctg 421 gaaagctgga ggtctcagga cgtaggaaga gggaggacct gacaagcaca ctcccctcct 481 ctcagccacc ccagaaggag gaagatgcca gctgctcaga ggccgcaggg gtggaatcac 541 tgtcccagtc ctccagcaag cggtctcccc ctcggaagcg gtttgccttt tcccccagca 601 cctgggagct cacagaagag gaggaggctg aggaccagga agacagctcc tctatggctc 661 tcccatcccc tcacaaaagg gcccccctcc agagtcggag gcttcggcaa gccagcagcc 721 aggcggggag gctctggtcc cggccccctc tcaattactt ccacctaatt gccctggcat 781 taagaaacag ttccccctgt ggcctcaacg tgcaacagat ctacagtttc actcgaaagc 841 acttcccctt tttccggacg gccccggaag gctggaagaa tactgtccgt cacaatctct 901 gttttcgaga cagctttgag aaagtgcctg tcagcatgca gggcggggcc agcacacggc 961 ctcgatcttg cctctggaag ttgaccgagg agggacaccg ccgctttgcg gaggaggccc 1021 gcgccttggc ttccactcgg ctagaaagta tccaacagtg catgagccag ccagatgtga 1081 tgcccttcct ctttgatctt taaccccaag aagcaacagc cagctaatgc tttattaaaa 1141 ttaccctcac taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1201 aaaaaaaaaa aaaaaaaaaa aaaaaag //