LOCUS BC028171 2630 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens sulfotransferase family 4A, member 1, mRNA (cDNA clone
MGC:40032 IMAGE:5243984), complete cds.
ACCESSION BC028171
VERSION BC028171.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2630
/db_xref="H-InvDB:HIT000040475"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40032 IMAGE:5243984"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2630
/gene="SULT4A1"
/gene_synonym="BR-STL-1"
/gene_synonym="BRSTL1"
/gene_synonym="DJ388M5.3"
/gene_synonym="hBR-STL-1"
/gene_synonym="NST"
/gene_synonym="SULTX3"
/db_xref="GeneID:25830"
/db_xref="HGNC:HGNC:14903"
/db_xref="MIM:608359"
CDS 89..871
/gene="SULT4A1"
/gene_synonym="BR-STL-1"
/gene_synonym="BRSTL1"
/gene_synonym="DJ388M5.3"
/gene_synonym="hBR-STL-1"
/gene_synonym="NST"
/gene_synonym="SULTX3"
/codon_start=1
/product="SULT4A1 protein"
/protein_id="AAH28171.1"
/db_xref="GeneID:25830"
/db_xref="HGNC:HGNC:14903"
/db_xref="MIM:608359"
/translation="MAESEAETPSTPGEFESKYFEFHGVRLPPFCRGKMEEIANFPVR
PSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDEQLPVLEYPQPGLDIIKEL
TSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLRTMSYRGTFQE
FCRRFMNDKLGYGSWFEHVQEFWEHRMDSNVLFLKYEDMHRDLVTMVEQLARFLGVSC
DKAQLEALTEHCHQLVDQCCNAEALPVGRAHCVFARKIFLSW"
BASE COUNT 631 a 619 c 742 g 638 t
ORIGIN
1 cgcgagcgtg tgcggggcgc gggcgcgggc gcgggcgcgt gcgggctgcg agccgggagg
61 cggcggcggc gacggcgacg gcggcggcat ggcggagagc gaggccgaga cccccagcac
121 cccgggggag ttcgagagca agtacttcga gttccatggc gtgcggctgc cgcccttctg
181 ccgcgggaag atggaggaga tcgccaactt cccggtgcgg cccagcgacg tgtggatcgt
241 cacctacccc aagtccggca ccagcttgct gcaggaggtg gtctacttgg tgagccaggg
301 cgctgacccc gatgagatcg gcttgatgaa catcgacgag cagctcccgg tcctggagta
361 cccacagccg ggcctggaca tcatcaagga actgacctct ccccgcctca tcaagagcca
421 cctgccctac cgctttctgc cctctgacct ccacaatgga gactccaagg tcatctatat
481 ggctcgcaac cccaaggatc tggtggtgtc ttattatcag ttccaccgct ctctgcggac
541 catgagctac cgaggcacct ttcaagaatt ctgccggagg tttatgaatg ataagctggg
601 ctacggctcc tggtttgagc acgtgcagga gttctgggag caccgcatgg actcgaacgt
661 gctttttctc aagtatgaag acatgcatcg ggacctggtg acgatggtgg agcagctggc
721 cagattcctg ggggtgtcct gtgacaaggc ccagctggaa gccctgacgg agcactgcca
781 ccagctggtg gaccagtgct gcaacgctga ggccctgccc gtgggccggg cacattgcgt
841 ctttgctcgg aagatcttct tgagttggtg agaatgcagg gccgagtagc cagctgcatt
901 gcttagattt gattcatgtc acagcataaa ttgtcttgat tccaaatcct aaaccaggaa
961 gagttgggct gtggaaggac atcttcaccg tctccatgaa tgagaagttt gacttggtgt
1021 ataaacagaa gatgggaaag tgtgacctca cgtttgactt ttatttataa taacagaaac
1081 aacaacctgc atgctcacaa tacccagaca gtctactagc caaaagtcct gtatgcattc
1141 atttattcct tgctggacaa actctggaag cagcgtgtga aacagcgggg gaagggaaga
1201 gcggcgtgag cggagggagt gtgatgattc ccaaccgaaa gcagctgtct cgcctttaga
1261 acgtgcagcc tctccatgtc tgattacaaa cagtctccac attgcagttc caatggcctg
1321 gaccgtaagg ataaagcctg taatatatgc aactagaatg tctgcctttt caaccccgta
1381 ttatttattg tattttatag agcttttcac tggaaatcta cataaatgtc agtaaaccaa
1441 ataaaagttc atttccaagg ggaatcagga gcgagccaca cccgaatggt agaaagatct
1501 cagggttaac tctttatttt tgtagtttta ttatctaagg cacagccatt ctgttctcac
1561 ttggttctga gatagtggtg agaacagagg atgagttggg tctgttgggg ggaatctgga
1621 cacttgttta ttctgacgga gttcacttct tcagaacctt cctgaaatga gcagaaattg
1681 ttcactaggt cttcagaatg gacgtccttc tgccagagac ttccagcggg cggctccaaa
1741 ggcccaatgc agaggagccc gcggagcatg tgctgaggga agtctgcctg gtgaggctgg
1801 caggtgggag tctaatgcag tcaggagcat ttgcatgcag tgggtggaga gtcggccacc
1861 aaaggaccga gttgcgctcg gaatttgagc tgaattccac agccttactt tgtttcctga
1921 agtgatagcc tactaatgct ggcaagcaga tgcttaatag taaatttcta aaatccccgg
1981 gtctttatca ttcagtttgt tctgtgcacc tgaggcgctc agccgtggga ggaccatttt
2041 gcgagtgtag ccctgtttca ctcggatcag gttggcacgg ccgcctgcgt gtctgtccac
2101 ctcatccctc cgtgtatctg agggagtaaa ggtgaggtct ttattgcttc actgcctaat
2161 tttctcaccc acattcgctg aagcgatgga gagtcggggg ccagtagcca gccaaccccg
2221 tggggaccgg ggttgtctgt catttatgtg gctggaaagc acccaaagtg gtggtcagga
2281 gggtcgctgc tgtggaaggg gtctccgttc ttggtgctgt atttgaaacg ggtgtagaga
2341 gaagcttgtg tttttgtttg taatggggag aagcgtggcc aggcaggtgg cacgtggcat
2401 cgcatggtgg gctcggcagc accttgcctg tgtttctgtg agggaggctg ctttctgtga
2461 aatttcattt atatttttct atttttagta ctgtatggat gttactgagc actacacatg
2521 atccttctgt gcttgcttgc atctttaata aagacatgtt cccggaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//