LOCUS BC028138 2803 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens ubiquitin associated and SH3 domain containing, A,
mRNA (cDNA clone MGC:39914 IMAGE:5215324), complete cds.
ACCESSION BC028138
VERSION BC028138.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2803)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2803)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9507220.
FEATURES Location/Qualifiers
source 1..2803
/db_xref="H-InvDB:HIT000040458"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39914 IMAGE:5215324"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2803
/gene="UBASH3A"
/db_xref="GeneID:53347"
/db_xref="MIM:605736"
CDS 37..1392
/gene="UBASH3A"
/codon_start=1
/product="UBASH3A protein"
/protein_id="AAH28138.1"
/db_xref="GeneID:53347"
/db_xref="MIM:605736"
/translation="MAAGETQLYAKVSNKLKGRSSPSLLEPLLAMGFPVHTALKALAA
TGRKTAEEALAWLHDHCNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKN
RAHEVFPHVTLCDFFTCEDQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFF
VSGSPADVIREFAMTFATEASLLADCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARAI
PLGHSCQWTAALYSRDMRFVHYQTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEAS
EGWVIGISQRTGCRGFLPENYTDRASESDTWVKHRMYTFSLATDLNSRKDGEASSRCS
GEFLPQTARSLSSLQALQATVARKSVLVVRHGERVDQIFGKAWLQQCSTPDGNYYRPD
LNFPCSLPRRSRGIKDFENDPPLSSCGIFQSRIAGMFEDCLVGKVTITATLIMASRHP
A"
misc_feature 103..246
/gene="UBASH3A"
/note="UBP14; Region: COG5207, UBP14, Isopeptidase T
[Posttranslational modification, protein turnover,
chaperones]"
/db_xref="CDD:COG5207"
misc_feature 757..927
/gene="UBASH3A"
/note="SH3; Region: Src homology 3 domains"
/db_xref="CDD:smart00326"
BASE COUNT 737 a 757 c 757 g 552 t
ORIGIN
1 gtgcaggcga gcttcttggc ctaagggcag gaagagatgg cagcggggga gacgcagctc
61 tacgccaagg tctccaacaa gctcaagggc cgcagcagcc cctcgctcct ggagcccctc
121 ctggccatgg gcttcccggt gcacaccgcg ctgaaagcgt tggcagccac ggggaggaag
181 acggcggagg aggccttggc ctggctgcat gatcattgca atgacccttc cctagacgac
241 cccatccccc aggagtatgc ccttttcctc tgtccaacgg ggcccctgct ggaaaaactt
301 caagagttct ggagagagag caagcgccag tgtgcaaaga acagagctca tgaggtcttc
361 ccacacgtga cactctgtga cttcttcacg tgtgaagacc agaaggtgga atgcctgtac
421 gaggcgctga agagagctgg agacaggctc ctgggctcct tccccacggc cgtgcctctg
481 gctctccact cctccatcag ctacctcggc ttcttcgtca gtggcagccc cgcagacgtc
541 atccgggaat tcgccatgac cttcgccacg gaagcatctc tcttagcaga ctgctccgtg
601 aagccttgca ccaaacagct gcatctgacc ttggcccaca agttctaccc ccaccaccag
661 aggacgctgg agcagctggc cagagccatc cccctgggcc acagctgcca gtggaccgca
721 gcactctact cccgagacat gcgctttgtg cactaccaga ccctgagagc cctattccag
781 tacaaacccc agaacgtgga tgagctgacg ctaagtcctg gtgactacat ctttgtggac
841 cccacgcagc aggacgaagc cagcgagggc tgggtgattg ggatctcaca gcggacgggc
901 tgccggggct tcctgccgga aaactacacg gatcgagcca gtgagtctga cacgtgggtg
961 aagcacagga tgtacacctt cagtctagcc acagacctga actccagaaa ggatggtgaa
1021 gccagcagca gatgcagcgg ggaatttctt ccacaaacgg caaggagtct tagcagctta
1081 caggccttgc aggctaccgt tgcaaggaag agtgtgctgg tggttcgcca cggggagaga
1141 gtggatcaga tcttcgggaa ggcatggctg cagcaatgct ccactcctga tgggaattac
1201 tacaggccag acctgaattt cccctgcagt ctgccaagac ggagtcgtgg gatcaaagac
1261 tttgaaaacg atcccccatt atcatcgtgt ggcattttcc agtccagaat tgcaggtatg
1321 tttgaggact gtctagtagg aaaggtaaca ataacagcaa cactgattat ggctagcagg
1381 catccagcct gagccctagc tacacaccct ttgatacagt gttagctttg tctccagtct
1441 gctgaggagg ctggggcaca gagaggttaa gcaacttgcc caaggtcaca cagcaagaaa
1501 gtggcaatgt agaggtttga tctaggaatg gatgattcag gaagttggca ggaatgaaag
1561 aaaggcatgg aaagaacaag agaggggagg aaaaatcaac aaccaaggag ctccaaggag
1621 ctcacttttc aaatggaaaa ccacatcctc tcattcgttg gttttatttc aaaatctgtc
1681 actttgggct tttgtttcat gtctggcggt tctgcttcta cgtgactgag tttatgtaaa
1741 cagaagagac cattgagttc atcgagtctt catttcctga attcagaaaa tggaatccag
1801 agaagcaagt tacaccaatg gttaactgca gagaccccca cggcccactc gcccagggcc
1861 ccactcagag ccctccgctg tgtgcagacg gccaaactca tcctggaagg tcagtgagaa
1921 cctcgaactc aaactggaga aaaaaatcaa gatacgagtg gaacctggaa tctttgaatg
1981 gacaaaatgg gaagctggca aaccacccca accctcatga gcctggaaga gctgaaagag
2041 gcaaatttca acattgacac tgattacagg cccgcgtttc ccctgtccgc cctcatgccg
2101 gccgagagct accaggagta catggacagg tgcacggcga gtatggtgca aatcgtcaac
2161 acctgtccac aggacacggg tgtcatccta attgtgagtc acggctccac tctggactcc
2221 tgcacgcggc cactgctcgg gctgccgccc cgggaatgtg gggattttgc ccaactcgtg
2281 agaaagatcc cttccctggg catgtgcttc tgtgaagaaa ataaagagga aggaaaatgg
2341 gagttggtga acccaccggt gaagaccctg acccacgggg cgaacgcagc atttaactgg
2401 aggaactgga tctcaggcaa ctgagagcca cggtgatgtt gtcataacct cagagtggag
2461 aggcagaaac catgtgcaga ggctgggaga tgctgctgtt tccagaggcg tcttagtctc
2521 acccaatgtg atttgtagaa gcacgagacg cacttttata tcccggaata tttccctccg
2581 gctttcgcct ttgtaactcc catctgtgga cccatcgtcc accagcccag ctgcggggag
2641 cacagggcag gtggctgggt gaggatgccg ccctgcagca tgtacaccga gtgtctgcag
2701 ctggggacac aactgcccgg gactctaact tccaggaatt aaagactcac cacacacgaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//