LOCUS BC028118 1147 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 218, mRNA (cDNA clone
MGC:40222 IMAGE:3922009), complete cds.
ACCESSION BC028118
VERSION BC028118.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1147)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1147)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749456.
FEATURES Location/Qualifiers
source 1..1147
/db_xref="H-InvDB:HIT000040445"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40222 IMAGE:3922009"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1147
/gene="C6orf218"
/gene_synonym="MGC40222"
/db_xref="GeneID:221718"
/db_xref="HGNC:HGNC:28626"
CDS 279..635
/gene="C6orf218"
/gene_synonym="MGC40222"
/codon_start=1
/product="chromosome 6 open reading frame 218"
/protein_id="AAH28118.1"
/db_xref="GeneID:221718"
/db_xref="HGNC:HGNC:28626"
/translation="MDSSDETGSSFMSFWPHLQSDDLARNGITGFPYFSFIILNESDQ
ILELDGTLVKIWLLVPSHQPATHFKFEETKTHGPYVITGDYPRSLWQKSASSLPASPP
CLWYFLPTLGCFCDHT"
BASE COUNT 341 a 251 c 232 g 323 t
ORIGIN
1 ccacgcgtcc gtactaatga gaccgctgag gatcaaaggg gttttccacc acatccactc
61 acctctacat ggcgaaaacc aagggttcac tctctgtctt cagggagctc cacccagcag
121 cagcgtttga cagagctgtt cacttcctct tcctggagct gtggcttcca gagcccatgc
181 tcagcagttc ccctccttct tcgactgctc ctctcttagg ctcagagcca ctcagacatt
241 gggaagcaag tttgtcaaga tgacagagaa ccgaggtaat ggattcgagt gatgaaacag
301 gaagttcatt catgagtttt tggccacacc tccaaagtga cgacttagcc agaaatggga
361 taactgggtt tccctacttc tcttttatca tcctcaatga gagtgaccaa atattagagc
421 tagatggaac cttagtgaaa atctggctac tcgtcccgtc ccaccagcct gccacccatt
481 tcaagtttga agagacaaag acacatggac cttatgtaat tactggggat taccccagga
541 gtctgtggca aaagtcagct tcttccctcc ctgcttcccc gccctgtctc tggtactttc
601 taccaacact gggctgtttc tgtgatcaca cttaagcgta cctaacctgc gaatgctgta
661 tagaaggtgc taatgaacat gatttagctt taacactcag ttttctaaag ggacacgtgg
721 gggcagcaaa tgtttaggca aaaacaattc cagttctagc ctctactgtc tacatatgtg
781 tatacatttg ggaaacgttt gggaaaggga tatttgagag cttctttttc ttttttgtgg
841 tttagttatt tgatgatatt gagattgttt ctgagccatg tgcttcaaca tcggattggg
901 gatttcagaa aaagttttag tcactgtgat tccatttagc ttccaaatgt gtctctgcta
961 agagacttaa aagcactcat aaatagcacg tgtgtcttct ttgcagtgtt tgctaatttt
1021 gagtcacatc tttttagaaa atcatgagat ttggtgtcac agagactgga ataaatatag
1081 tcaaacttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaa
//