LOCUS BC028078 3119 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-X3-C motif) receptor 1, mRNA (cDNA clone MGC:40024 IMAGE:5216452), complete cds. ACCESSION BC028078 VERSION BC028078.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3119) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3119) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: i Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68348719. FEATURES Location/Qualifiers source 1..3119 /db_xref="H-InvDB:HIT000040428" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40024 IMAGE:5216452" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3119 /gene="CX3CR1" /gene_synonym="CCRL1" /gene_synonym="CMKDR1" /gene_synonym="GPRV28" /gene_synonym="V28" /db_xref="GeneID:1524" /db_xref="HGNC:HGNC:2558" /db_xref="MIM:601470" CDS 77..1144 /gene="CX3CR1" /gene_synonym="CCRL1" /gene_synonym="CMKDR1" /gene_synonym="GPRV28" /gene_synonym="V28" /codon_start=1 /product="chemokine (C-X3-C motif) receptor 1" /protein_id="AAH28078.1" /db_xref="GeneID:1524" /db_xref="HGNC:HGNC:2558" /db_xref="MIM:601470" /translation="MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFYSVIFAI GLVGNLLVVFALTNSKKPKSVTDIYLLNLALSDLLFVATLPFWTHYLINEKGLHNAMC KFTTAFFFIGFFGSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILV AAPQFMFTKQKENECLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTL FSCKNHKKAKAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLALS VTETVAFSHCCLNPLIYAFAGEKFRRYLYHLYGKCLAVLCGRSVHVDFSSSESQRSRH GSVLSSNFTYHTSDGDALLLL" BASE COUNT 830 a 782 c 643 g 864 t ORIGIN 1 gtaaagtctg agcaggacag ggtggctgac tggcagatcc agaggttccc ttggcagtcc 61 acgccaggcc ttcaccatgg atcagttccc tgaatcagtg acagaaaact ttgagtacga 121 tgatttggct gaggcctgtt atattgggga catcgtggtc tttgggactg tgttcctgtc 181 catattctac tccgtcatct ttgccattgg cctggtggga aatttgttgg tagtgtttgc 241 cctcaccaac agcaagaagc ccaagagtgt caccgacatt tacctcctga acctggcctt 301 gtctgatctg ctgtttgtag ccactttgcc cttctggact cactatttga taaatgaaaa 361 gggcctccac aatgccatgt gcaaattcac taccgccttc ttcttcatcg gcttttttgg 421 aagcatattc ttcatcaccg tcatcagcat tgataggtac ctggccatcg tcctggccgc 481 caactccatg aacaaccgga ccgtgcagca tggcgtcacc atcagcctag gcgtctgggc 541 agcagccatt ttggtggcag caccccagtt catgttcaca aagcagaaag aaaatgaatg 601 ccttggtgac taccccgagg tcctccagga aatctggccc gtgctccgca atgtggaaac 661 aaattttctt ggcttcctac tccccctgct cattatgagt tattgctact tcagaatcat 721 ccagacgctg ttttcctgca agaaccacaa gaaagccaaa gccattaaac tgatccttct 781 ggtggtcatc gtgtttttcc tcttctggac accctacaac gttatgattt tcctggagac 841 gcttaagctc tatgacttct ttcccagttg tgacatgagg aaggatctga ggctggccct 901 cagtgtgact gagacggttg catttagcca ttgttgcctg aatcctctca tctatgcatt 961 tgctggggag aagttcagaa gataccttta ccacctgtat gggaaatgcc tggctgtcct 1021 gtgtgggcgc tcagtccacg ttgatttctc ctcatctgaa tcacaaagga gcaggcatgg 1081 aagtgttctg agcagcaatt ttacttacca cacgagtgat ggagatgcat tgctccttct 1141 ctgaagggaa tcccaaagcc ttgtgtctac agagaacctg gagttcctga acctgatgct 1201 gactagtgag gaaagatttt tgttgttatt tcttacaggc acaaaatgat ggacccaatg 1261 cacacaaaac aaccctagag tgttgttgag aattgtgctc aaaatttgaa gaatgaacaa 1321 attgaactct ttgaatgaca aagagtagac atttctctta ctgcaaatgt catcagaact 1381 ttttggtttg cagatgacaa aaattcaact cagactagtt tagttaaatg agggtggtga 1441 atattgttca tattgtggca caagcaaaag ggtgtctgag ccctcaaagt gaggggaaac 1501 cagggcctga gccaagctag aattccctct ctctgactct caaatctttt agtcattata 1561 gatcccccag actttacatg acacagcttt atcaccagag agggactgac acccatgttt 1621 ctctggcccc aagggcaaaa ttcccaggga agtgctctga taggccaagt ttgtatcagg 1681 tgcccatccc tggaaggtgc tgttatccat ggggaaggga tatataagat ggaagcttcc 1741 agtccaatct catggagaag cagaaataca tatttccaag aagttggatg ggtgggtact 1801 attctgatta cacaaaacaa atgccacaca tcacccttac catgtgcctg atccagcctc 1861 tcccctgatt acaccagcct cgtcttcatt aagccctctt ccatcatgtc cccaaacctg 1921 caagggctcc ccactgccta ctgcatcgag tcaaaactca aatgcttggc ttctcatacg 1981 tccaccatgg ggtcctacca atagattccc cattgcctcc tccttcccaa aggactccac 2041 ccatcctatc agcctgtctc ttccatatga cctcatgcat ctccacctgc tcccaggcca 2101 gtaagggaaa tagaaaaacc ctgcccccaa ataagaaggg atggattcca accccaactc 2161 cagtagcttg ggacaaatca agcttcagtt tcctggtctg tagaagaggg ataaggtacc 2221 tttcacatag agatcatcct ttccagcatg aggaactagc caccaactct tgcaggtctc 2281 aacccttttg tctgcctctt agacttctgc tttccacacc tggcactgct gtgctgtgcc 2341 caagttgtgg tgctgacaaa gcttggaaga gcctgcaggt gctgctgcgt ggcatagccc 2401 agacacagaa gaggctggtt cttacgatgg cacccagtga gcactcccaa gtctacagag 2461 tgatagcctt ccgtaaccca actctcctgg actgccttga atatcccctc ccagtcacct 2521 tgtggcaagc ccctgcccat ctgggaaaat accccatcat tcatgctact gccaacctgg 2581 ggagccaggg ctatgggagc agcttttttt tcccccctag aaacgtttgg aacaatctaa 2641 aactttaaag ctcgaaaaca attgtaataa tgctaaagaa aaagtcatcc aatctaacca 2701 catcaatatt gtcattcctg tattcacccg tccagacctt gttcacactc tcacatgttt 2761 agagttgcaa tcgtaatgta cagatggttt tataatctga tttgttttcc tcttaacgtt 2821 agaccacaaa tagtgctcgc tttctatgta gtttggtaat tatcatttta gaagactcta 2881 ccagactgtg tattcattga agtcagatgt ggtaactgtt aaattgctgt gtatctgata 2941 gctctttggc agtctatatg tttgtataat gaatgagaga ataagtcatg ttccttcaag 3001 atcatgtacc ccaatttact tgccattact caattgataa acatttaact tgtttccaat 3061 gtttagcaaa tacatatttt atagaacttc aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //