LOCUS BC028051 1616 bp mRNA linear HUM 06-OCT-2017
DEFINITION Homo sapiens PHD finger protein 2, mRNA (cDNA clone IMAGE:4943275),
partial cds.
ACCESSION BC028051
VERSION BC028051.3
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1616)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1616)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 1616)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2017) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Oct 6, 2017 this sequence version replaced BC028051.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: c Column: 8.
FEATURES Location/Qualifiers
source 1..1616
/db_xref="H-InvDB:HIT000091464"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4943275"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1616
/gene="PHF2"
/gene_synonym="GRC5"
/gene_synonym="KIAA0662"
/db_xref="GeneID:5253"
/db_xref="MIM:604351"
CDS <1..1388
/gene="PHF2"
/gene_synonym="GRC5"
/gene_synonym="KIAA0662"
/codon_start=3
/product="PHF2 protein"
/protein_id="AAH28051.3"
/db_xref="GeneID:5253"
/db_xref="MIM:604351"
/translation="IREQTKSKSEAKWKYKNSKPDSLLKMEEEQKLEKSPLAGNKDNK
FSFSFSNKKLLGSKALRPPTSPGVFGALQNFKEDKPKPVRDEYEYVSDDGELKIDEFP
IRRKKNAPKRDLSFLLDKKAVLPTPVTKPKLDSAAYKQSDDSSDEGSLHIDTDTKPGR
NARVKKESGSSAAGILDLLQASEEVGALEYNPSSQPPASPSTQEAIQGMLSMANLQAS
DSCLQTTWGAGQAKGSSLAAHGARKNGGGSGKSAGKRLLKRAAKNSVDLDDYEEEQDH
LDACFKDSDYVYPSLESDEDNPIFKSRSKKRKGSDDAPYSPTARVGPSVPRQDRPVRE
GTRVASIETGLAAAAAKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTST
TPASTTPASTTPASTTPALSTPTCPVWRDAVPRARDWVGEGESHGAPGLFRTGVFKVS
FTLPLLNIYII"
BASE COUNT 436 a 444 c 416 g 320 t
ORIGIN
1 aaattcgaga gcaaaccaag agcaagtcag aggccaagtg gaagtacaag aacagcaaac
61 ctgactcctt actgaagatg gaagaggagc agaagctaga gaagtcgcct ctagctggaa
121 acaaagacaa taagttctct ttttctttct ccaacaagaa actcctcggc tccaaggctc
181 tcaggccccc gacgagccct ggtgtgttcg gggccttgca gaacttcaag gaggacaagc
241 ccaagcccgt gcgggatgag tatgagtacg tgtcggatga cggtgagctc aagatcgacg
301 agtttcccat caggaggaag aaaaacgccc cgaaaaggga cttgtccttc ttgttggata
361 agaaggctgt gctgcccacg cctgtcacga agccaaagct ggactcggca gcgtacaagc
421 agagtgatga ctcctcggac gagggttcgc tgcacatcga cacagacacc aagcccggcc
481 gcaatgccag agtcaagaag gagagtggga gctcggcagc tggcatcttg gacctgctgc
541 aggccagtga ggaggttggc gcgctggagt acaaccccag cagccagccc ccggcctccc
601 ccagcacaca ggaagccatt cagggaatgc tgtccatggc caacctgcag gcctccgact
661 cctgcctgca gaccacgtgg ggagctggcc aggccaaggg gagctcgctg gctgcccatg
721 gtgcccggaa gaatgggggt ggcagtggca agagtgcagg caaacgactg ctgaagaggg
781 ctgccaagaa cagtgtcgac ctggacgact acgaggaaga gcaggaccac ctggatgcct
841 gcttcaagga ctcagactac gtttacccct cactggagtc agatgaagac aaccccatct
901 ttaagtcccg gtcgaagaaa aggaaaggct cagacgacgc tccctacagc ccaacagcaa
961 gggtcggccc atcggtgcca agacaggaca ggcctgtgcg tgagggtaca cgggtggctt
1021 ccatcgagac cgggctggcg gctgctgcag ctaagttgtc ccagcaggag gagcagaaaa
1081 gcaagaaaaa aaagagtgcc aagaggaagc tgactcctaa caccacctcc ccttccacct
1141 ccacctccat ctctgccggc accacctcca cctccaccac gccagcctct accacccctg
1201 cctccaccac accggcctcc accacaccgg ccttatccac tcccacttgt cctgtttgga
1261 gggacgcagt ccctagggcc cgagactggg tgggagaggg ggagtctcac ggggccccag
1321 gcttattcag aactggtgtt tttaaagttt cctttaccct gcccttgttg aacatttata
1381 taatctaacc tggacatcaa gctgttctct ctctctcttt tttttaattt tattattatt
1441 attttggcaa catgtacatt tctaacaaag tttatcgtgg ctattaaagt gttttatttc
1501 ccaattcata ttactcttgt atcgagtcca tgaggtctaa ggcaacttag atcaaagttt
1561 taaaaaagta aaaatatttc aggttttgta caaaaaaaaa aaaaaaaaaa aaaaaa
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